| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1810 |
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| Symbol | |
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| ID | 8012868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012850 |
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| Strand | + |
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| Start bp | 1801297 |
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| End bp | 1802313 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644824401 |
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| Product | TIM-barrel protein, nifR3 family |
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| Protein accession | YP_002975634 |
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| Protein GI | 241204538 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.752321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.00592071 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTGCCCGA AAGATAATCA TTTGATTTCC AAGGACCTCG CAGCGCCTTT CCAAATCGGA
CCCGTGTCCG TGCGGAACCG CGTTGTACTG GCGCCGATGT CCGGCGTCAC GGATATGCCC
TTCCGCGAGC TTGCCTGGCG CTTCGGCGCT GGCCTCGTCG TCACCGAGAT GGTGGCGAGC
CGTGAACTGG TCAACGACAC GGCCGAATCC TGGTCGCGGC TTAGCGCTGC GGGCTTCCGG
CCGCATATGG TGCAGCTTGC CGGGCGCGAG GCGCACTGGA TGGCGGAGGC GGCCAAGATC
GCCGCCGATC ACGGCGCCGA TATCATCGAC ATCAACATGG GTTGCCCGGC AAAGAAAGTG
ATCGGCGGTT ATTCCGGCTC GGCGCTGATG CGCGATCCCG ATCACGCGCT CGGCCTCATC
GAGGCGACGG TCAAGGCCGT CGACATTCCG GTGACGCTGA AGATGCGCCT TGGCTGGGAT
GAGAATTCGA TCAACGCGCC TGATATCGCC CGCCGCGCCG AGGCGGCCGG CATCCAGCTT
GTGACCATTC ATGGGCGCAC CCGCATGCAA TTCTATGAAG GCCGCGCCGA TTGGGATGCG
ATCCGCGCCG TCCGCGAGGT GATCTCCATT CCGCTGATCG CCAACGGTGA TGTCGAAACG
GCAAGCGATG CGCAGGAAAT ATTGCGCCGC TCCGGCGCCG ATGCCGTGAT GATCGGCAGG
GGCTGCCAGG GCAGGCCATG GCATGCCGGC GTCATATCGG GGGCGCCCGC ACCGCAATCC
CTGAAGATCG CCGATATCGC CGTCGAGCAT TACCGGATGA TGCTGGATTT CTACGGCGAG
GCGGTGGCGA TCCGCCATGC CCGCAAGCAC CTTGGCTGGT ATCTCCAGCG TTTCGCGCCT
GATCTGTCAG GCCCTGAAAA GGCTGAGATC ATGACCTCGC GCGACCCGCG CGAGGTGGCC
GCGCGCCTTT ACGATGCATT GGCGGCCAGT GTTGTCGACA GCCGGGAGGC GGCATGA
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| Protein sequence | MCPKDNHLIS KDLAAPFQIG PVSVRNRVVL APMSGVTDMP FRELAWRFGA GLVVTEMVAS
RELVNDTAES WSRLSAAGFR PHMVQLAGRE AHWMAEAAKI AADHGADIID INMGCPAKKV
IGGYSGSALM RDPDHALGLI EATVKAVDIP VTLKMRLGWD ENSINAPDIA RRAEAAGIQL
VTIHGRTRMQ FYEGRADWDA IRAVREVISI PLIANGDVET ASDAQEILRR SGADAVMIGR
GCQGRPWHAG VISGAPAPQS LKIADIAVEH YRMMLDFYGE AVAIRHARKH LGWYLQRFAP
DLSGPEKAEI MTSRDPREVA ARLYDALAAS VVDSREAA
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