Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_1642 |
Symbol | |
ID | 8015584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 1633769 |
End bp | 1634725 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644824227 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002975468 |
Protein GI | 241204372 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.517952 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGCC GAAAACGTCA GTCCGACATT GGGAAGAGAT TGGCCAAGGC CATGCTTTCG CTCTGTCTTC TGTTTTCCCA AGTGGACACG GTAAAGGCCC AGCCTGAGGG GAGCGTCGGG CCGGCGGCCT GCTTGTATTC GGGACCTTCG GCGTTGGGAT CCGGTGAGAC GCTCTGCATC CGGAAAGATA GTTTCAACCG CGATCTTTGC GTCGCGATCG AGCATTTCGC CAGCGCCAGT CACTTGCCGC CGGATTATTT CGCCCGTCTC ATCTGGCGGG AAAGCACCTT TCGCCCCGAT GCCGTTAGCT TCAAGGGAGC GCAGGGGATT GCGCAATTCA TGCCCGGAAC GGCGAAACTG CGCGGTCTCG AGGACAGCTA CCAGGTATTG GAAGCCCTGC GGAAATCGGC GCAGTATCTC AACGAATTGC GCAATCGTTT CGGCAATCTC GGCCTTGCCG CCGCTGCCTA CAATGCCGGC GAAAATGGAC TTTCCTCTTA CCTTACGTCA GGGAGATTAC CTTACGACAC GCGCGGTTAC GTCCTGGCAA TCACCGCGCA TACGGTCGAG GAATGGAAGG ATAATCCGCC GGAAGACGCG GCTGCCCCGC TCGACAAGGA CAAGTCCTTC CTGGACGGCT GCGTGGCGCT TGCGGAGAGA CGGACGTTAA AGGACACGCC CTGGCGTCAG GAGGGTGAAT GGGCGCCCTG GGGCGTCCAG ATCGCCGCGA ATGCGAATGT CGCGATAGTC AGGCGAATGT TTCTCGATGC CGTGCAGGAT CTGCCCGCGC CCCTGAATGC GGAGCAGCCG CTGATCTTGC GCCAGCGTGA TCGCAGCTTT GGTTTTCGCC CACGTTATGC TGCCCGCATC GGCCGGCAGA CGCGCATGGA CGCCAACAAC CTCTGCAACC AGATCCGCAA ACACGGCGGC ACCTGCCTTG TTTTCAAAAA TCGATAG
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Protein sequence | MTRRKRQSDI GKRLAKAMLS LCLLFSQVDT VKAQPEGSVG PAACLYSGPS ALGSGETLCI RKDSFNRDLC VAIEHFASAS HLPPDYFARL IWRESTFRPD AVSFKGAQGI AQFMPGTAKL RGLEDSYQVL EALRKSAQYL NELRNRFGNL GLAAAAYNAG ENGLSSYLTS GRLPYDTRGY VLAITAHTVE EWKDNPPEDA AAPLDKDKSF LDGCVALAER RTLKDTPWRQ EGEWAPWGVQ IAANANVAIV RRMFLDAVQD LPAPLNAEQP LILRQRDRSF GFRPRYAARI GRQTRMDANN LCNQIRKHGG TCLVFKNR
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