| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_1580 |
|---|
| Symbol | |
|---|
| ID | 8012657 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 1567612 |
|---|
| End bp | 1570068 |
|---|
| Gene Length | 2457 bp |
|---|
| Protein Length | 818 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644824165 |
|---|
| Product | SMC domain protein |
|---|
| Protein accession | YP_002975407 |
|---|
| Protein GI | 241204311 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0419] ATPase involved in DNA repair |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.338996 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.282314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGA TCGACAAGAT ACATATCAAG GAATTCCGCG GCATTCGAGA GCTGACTCTC
ACCCTCAAAG GTCAGAACTT CGCGGCTTGT GGTCCAAACG GAACCGGCAA GAGCGGAATC
GTGGATGCGA TCGAATTCGT TCTCACCGGC AATATCTCGC GCCTAGCCGG CACTGGGACC
GGCGGTCTGT CCGTCAAGGC TCACGGCCCC CACGTCGATA GCCGCAACAA ACCGGAGGCT
GCATCGGTTA CACTCGACGT CATCATCCCA TCGCTGGGTA ACAAGAAGGC GCAGATCAGC
CGTTCCGTGA AAACGGTGAA CGCGCCGCAG ATCAAGCCCG CCGACAAGGA CGTTATAGCC
GCCTTCGAGA GCGTGACCCT CCATCCAGAA TTCGTCCTCT CGCGCCGCGA ATTGATCCGG
TACGTGCTTT CGGAGCCTGG AAACCGGTCA AAGGAAGTCC AATCGCTGTT GCGCCTCGAC
GATATCGAGA AGCTGCGCGG CGTCCTTCAG AAGATCGCAA ATTCCTGCTC CAGAGACTTG
CCTGGCTTCG AACGGGTAGA GAATGACTCC ATCACCAATC TGCTCGCTGT CCTCGACACG
CCACAGCTTT CCAAGAAATC CGTCCTGGAT TCAGTCAATC CTCGTCGCGA AATCTTAGGT
CTTGCGCCGC TTACCGACGT GGACGCCGCC ACATCACTCA AGGATGGCTT GACGACCGCC
ACGGCAACTG CACCTGGGCG CGTTTCCAAG GTTCAGGCGA CAGCCGACCT CGCGACGCTA
CGGGAAGCGC TGCAGGCGCT CCAAACGGAT CCCTTCAAAC AAGCATGCGC TACGGCTGAG
GCAAACGCGG CCGAGCTCGG CAACGACGCG GACAGCATCG ATGGTCTGTC TCGTGAATCC
CTCTTGAAGT CTGCCCTGGC GCTCTATGAT GGTTCTGCTT GCCCGGTCTG CGACACCCCG
TTCGAGCCGG ACGCGTTTAC TGGTCACGTG GCTGGAAAGC TCGCGCATCT TGAGGATGTG
AGCAAACGAC GCGCTGCGAT CGAGGCAGAA CTGAAGCCGA TCCTCGATAC GGTGCACGCC
GCGGGCACGG CCCTGAACAC CATGATTGAG CACGCCGGCT TGTTCTCGCC GAAGATCGAC
GTCGGCCCGC TCGTCGAGTT CAAGCTTGCT CTTCGTACGT GTTACCAGCA GGTCCAAAAA
CTCCTGCCGC TTGACGACAC CCGTGCGATC CTGACCATGG TCCACACTGT CCCGGACCTA
GAGCCGTCGC TCACTGCTCT GACAACTGCG ATTGCTGCAA TTCCGGAGCC TACCAAGCAG
GATGCGGCGC GCGACTTCCT TGTTCTCGCG CATGAACGAC TCGATAACTA CCGGAGGGCC
AGACAGAACC ACGCAGCCGG CCGAGTTCGC GCAGATCGGG CAACGAAGGT TTCGGCGACC
TACGGCGCCG TAACGACGGG CGCTCTCGAA AAAATTTACA AGAACGTCGA GACGGCGTTT
GCGAGCTACT ATAGTAAAAT CAACGAGGAC GATGAGAAGG CGTTCTCGGC GAAGCTGATA
CCATCCATCG GGAAGCTAGG CTTCGATGTG GACTTTTATG GTCGCGGCCA TTTTCCGCCT
GGCGCCTATC ATAGTGAGGG TCATCAGGAC GGAATGGGGC TTTGCCTCTA CCTCGCGCTC
ATGAGCCACC TGCTCGGCCA GAACTTCACG TTCGCTGTCC TCGACGACGT CCTAATGTCG
GTCGACTCCG GACACCGACG TCAGGTCTGC ACGCTCCTCA AGGAGATGTT CCCGAACACG
CAGTTCATTT TCACGACCCA CGACGAGATC TGGTTGCGGC ATATGAAGTC GGAGGGTCTG
ATCAAAGGCC GCAACTTCGC GCACTTCCGG ACCTGGACCG TGGATCTCGG ACCGACTGAA
TGGGACGATC GCGACGTTTG GACCGAGTTG GAAGAGCATC TCGCCAAAAA TGACGTACGA
GCTGCGGCGG CGCTTCTGCG CCACTACCTC GAGCACTTCG CCAAGGAGGC TTGCGACCGT
CTGCGTGCGA GCGTCGAATT TCGCGGTGAC GCCCAATTCG CGCTGGGCGA TCTTCTCCCC
AACGCGACCA GCACTTTGGC TGACCTGCTG AAAAAGGCCA AGGTCGCGGC CAACTCCTGG
AATCAGAAGG ATGTTGTCGA GCGGATCAGC GCGATCGAGG CGGCTTACAC CGAGGCCAAG
ACCAAGACCG GCTACGACAA CTGGCAGATC AATACGGCCG TGCATTTCAA CGAGTGGGCC
GACCTCCAGA AAGAGGATTT CACACCTGTG GTCGCCGCGT TCCGCGGATT CACCAGTTCG
TTTGGCTGTA CCACCTGCGG CGAGATGTAT TTCGTGGCTC CCGAGCGCGG CAAGAAGGAA
GCTTTGCGCT GTGGGTGCGG AACCTTGAAC TTGAATCTCT TGCGGAAGGG CGGCTAA
|
|---|
| Protein sequence | MIRIDKIHIK EFRGIRELTL TLKGQNFAAC GPNGTGKSGI VDAIEFVLTG NISRLAGTGT
GGLSVKAHGP HVDSRNKPEA ASVTLDVIIP SLGNKKAQIS RSVKTVNAPQ IKPADKDVIA
AFESVTLHPE FVLSRRELIR YVLSEPGNRS KEVQSLLRLD DIEKLRGVLQ KIANSCSRDL
PGFERVENDS ITNLLAVLDT PQLSKKSVLD SVNPRREILG LAPLTDVDAA TSLKDGLTTA
TATAPGRVSK VQATADLATL REALQALQTD PFKQACATAE ANAAELGNDA DSIDGLSRES
LLKSALALYD GSACPVCDTP FEPDAFTGHV AGKLAHLEDV SKRRAAIEAE LKPILDTVHA
AGTALNTMIE HAGLFSPKID VGPLVEFKLA LRTCYQQVQK LLPLDDTRAI LTMVHTVPDL
EPSLTALTTA IAAIPEPTKQ DAARDFLVLA HERLDNYRRA RQNHAAGRVR ADRATKVSAT
YGAVTTGALE KIYKNVETAF ASYYSKINED DEKAFSAKLI PSIGKLGFDV DFYGRGHFPP
GAYHSEGHQD GMGLCLYLAL MSHLLGQNFT FAVLDDVLMS VDSGHRRQVC TLLKEMFPNT
QFIFTTHDEI WLRHMKSEGL IKGRNFAHFR TWTVDLGPTE WDDRDVWTEL EEHLAKNDVR
AAAALLRHYL EHFAKEACDR LRASVEFRGD AQFALGDLLP NATSTLADLL KKAKVAANSW
NQKDVVERIS AIEAAYTEAK TKTGYDNWQI NTAVHFNEWA DLQKEDFTPV VAAFRGFTSS
FGCTTCGEMY FVAPERGKKE ALRCGCGTLN LNLLRKGG
|
|---|
| |