Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_0548 |
Symbol | |
ID | 8011739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | + |
Start bp | 571190 |
End bp | 571924 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644823138 |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_002974391 |
Protein GI | 241203295 |
COG category | [K] Transcription |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.216848 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCCT TGTCGCAAAC ATCCACGGAA GAAGACGACT ACGTTCAGGA AATAGCGGGC CTGAAGACCC AGTTCGATAT TTTCCGTTTC ATGAAACGGG TGACGGAAGC CTATCGCAGC CGTGCCTTCA TGGTTCTCAA CCTGCCGCCG ATCACCTCCT TCGATCTTCA GGGCAGCACC GTCATCACCA GCTGGCCGGC CGAGCTTCTG GCGCTCTACG ACCAGGAAGG CCTGATGGTG AACAGCCCGG TCCTCAGACG CCTCAGAACA TCGGCGCGGC CCTTCTTCTA CGACATGTCA CGGCAGAACT TGTCGCGGGA CGACGGTAAG TCCATTCTCG TCGCCTCCCT GTTCGAACGT TTCAAGATGA TGCGCTGCGC CTATTTCCCG ACGCATGAGC CCTCCGGCCT GCGCGGCGCC ATCTCTTTCG CCGGCGACCG CGAGCCCTTC AGTCCGGCCG AGATGCGTGA GCTCTGCTAC ATTTCCATCC ATATCTTTGA CAGGCTTGCC GAGATCCGCA ACCTCGATAC GCGCATGACG GATACGCTGA CCGACCGCGA GATCGATTGC CTCAACTGGA CGGCGGCCGG CAAGACCAGT GCTGAAATCG CCGAAATCCT CACCCTGTCC GAGCATACGG TCAATCACTA CCTCAACCGT GCCACCAAGA AGCTCGACAC GGTCAACCGT ACCCAGGCGG TCGCCAAGGC GTTGCGCATC GGCCTGATCA AATAA
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Protein sequence | MAPLSQTSTE EDDYVQEIAG LKTQFDIFRF MKRVTEAYRS RAFMVLNLPP ITSFDLQGST VITSWPAELL ALYDQEGLMV NSPVLRRLRT SARPFFYDMS RQNLSRDDGK SILVASLFER FKMMRCAYFP THEPSGLRGA ISFAGDREPF SPAEMRELCY ISIHIFDRLA EIRNLDTRMT DTLTDREIDC LNWTAAGKTS AEIAEILTLS EHTVNHYLNR ATKKLDTVNR TQAVAKALRI GLIK
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