| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_0288 |
|---|
| Symbol | |
|---|
| ID | 8011505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012850 |
|---|
| Strand | + |
|---|
| Start bp | 297598 |
|---|
| End bp | 298482 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822883 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002974138 |
|---|
| Protein GI | 241203042 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.341149 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAT TGGGTATCCA TTCATTTGTA TGGACAGGCG GCCAAACGCA GGAAGGGCTG
GAGATGGCCC TCAACAAGAC GGCCGAACAC GGATATCGCA CCATCGAATT TGCCTATCTG
CGCCCCGAGA AATTCAATCT CGATCGACTG GCAAAGCTTG CGCAGTCGCT TGACGTGGAG
ATTGGCGTGA CGATGGGCCT GCCGCTCGAC AGGGACGTAT CGAGCGAGGA TACCTCAGCT
GTGTCCGCCG GCAAGCAGAC GCTGGCCGAC GCCGTTCGGG CGGTCCGTGA CATCGGCGGC
AACAAGCTGG GCGGAATTCT CTATTCCGCG CACACCAAGT ACAATCGCCA ACCGACGAAG
AAGGGCTGGG ACAATAGCGT CGCCGCGATC GCCGCAACCG CCGAAGTCGC CAGACAAGCG
AACGTCGACC TCGTCCTGGA GGTTGTCAAC CGGTTCGAGA CCAACCTGCT GAATACGGCA
GCGCAGGGGC TGAAGTTCGT CGCCGAGACG GGATCGGAGC ATGTCCGTCT CCACCTCGAC
ACATTCCATA TGAACATCGA GGAAGCCAAT CCGGCCGCGG CGATCCGCTT GGCCGGCGAC
AAGGTCGGCT ACTTCCACAT CGGCGAGAGC AATCGCGGTT ACCTCGGTGA CGGTGTCATC
AACTTCGATC TGATCTTCGA CGCTCTGCTC GACATCGACT ACAAGCGCGA CATCGTGTTC
GAAAGCTTCT CGACGACGGT CGTGGACGAA GGCCTGTCGC TCGCCTGTGC GATCTGGCGC
GACACCTGGG AGGATAATGA TCCGCTTGCG GCGCACGCGA AGCGCTACAT CGAGCTGAAA
TATGACGAGG CCAAGCGCCG CCGCGCCACA AACGCGCGGC CCTGA
|
|---|
| Protein sequence | MRRLGIHSFV WTGGQTQEGL EMALNKTAEH GYRTIEFAYL RPEKFNLDRL AKLAQSLDVE
IGVTMGLPLD RDVSSEDTSA VSAGKQTLAD AVRAVRDIGG NKLGGILYSA HTKYNRQPTK
KGWDNSVAAI AATAEVARQA NVDLVLEVVN RFETNLLNTA AQGLKFVAET GSEHVRLHLD
TFHMNIEEAN PAAAIRLAGD KVGYFHIGES NRGYLGDGVI NFDLIFDALL DIDYKRDIVF
ESFSTTVVDE GLSLACAIWR DTWEDNDPLA AHAKRYIELK YDEAKRRRAT NARP
|
|---|
| |