Gene Rleg2_6237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_6237 
Symbol 
ID6983310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011370 
Strand- 
Start bp179786 
End bp180400 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content51% 
IMG OID643399249 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002284005 
Protein GI209552089 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.250294 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.446462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC TCCTCCACGA CACCCCAAAC CGCGGGCCTG CCGAACACGC TGTCCGCGAC 
CAGATCATAA AGACGGCAGC CGACTATTTC GGCCATTATG GCTACACAAA AACGACGGTT 
GCGGACCTCG CTCGTGAATT GGGATTTTCG AAAACATATG TCTATCGCTT TTTCGAATCG 
AAACAGGCGA TAGGCGAAGA GATTTGCGCA GCGCATCTGA CTGTTCTTCT AGATAACGCC 
AGAGAAGAGC TGCGCAAGGG CACAAGTGCG TCTGACCAGC TCAGGCGCTT TTTTGGAAGT 
GTTTCAGCGC ACACTGCTAG GCTTCTACAC GAAGATAAAA GAATATATGA GATTGCCGTT 
ATCGCATGCA TAGAGGATTG GGCTCCCGCC ATTTCTTATC TCGATACTTT GCGGGCTATC 
ATTACCGATA TTGTCCAATA TGGCCGTGAC CGCGGCGAGT TCGAGAAAAA GACGCCTATC 
GACGAGATAT CGCGATCGAT TCTGTTTGCG ATGACCCCTT TCATTGACCC CGTCTATCTG 
GATCGTAACC TAAAGCATCT GCCCTCGGCA CAGACCGAAA TGGTAGGATT GGTGCTGAGA 
AGCCTTGCGG TGTAA
 
Protein sequence
MTNLLHDTPN RGPAEHAVRD QIIKTAADYF GHYGYTKTTV ADLARELGFS KTYVYRFFES 
KQAIGEEICA AHLTVLLDNA REELRKGTSA SDQLRRFFGS VSAHTARLLH EDKRIYEIAV 
IACIEDWAPA ISYLDTLRAI ITDIVQYGRD RGEFEKKTPI DEISRSILFA MTPFIDPVYL 
DRNLKHLPSA QTEMVGLVLR SLAV