Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5995 |
Symbol | |
ID | 6977381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011366 |
Strand | + |
Start bp | 415934 |
End bp | 417832 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643393447 |
Product | ABC transporter related |
Protein accession | YP_002278265 |
Protein GI | 209546375 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.210924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAGG AACTGGAAAC CGAGCGTCCC GACGTTCGCG AGGATGGGCG CCGCCCGCCG CGAGCAGTGG TCGGTTCGCA TCGCGTCGAG GAGGAGATGT TCGGCAAGGC CTTCGACGGC AATATCGTCA AGCGAATCTG GGCTTTCGTT CACCCCTATC GCCGCCAGGT CGCCTGGTCG GTCGTCGCCG TCCTGACCTT CACGATGATG CAATTGCTGA TCCCGCTGAT CATCCGTTAC GCCATCGATC ACGGCATGTC GCCGGGCGGC AGTTCTTCGG CGCTGATCTG GTCGATCGCC GCCTTCGCCA TCGCCATATC AATCAACTAT GCGGCGAGCT ACGCGCAGGA GACGCTGGTC GGCGGCGTCG CGGAAGACGT GCTCTTCGAT ATCCGCAAGG CGATGTTTTC GCATCTCCAG CGCGTCTCGC TCTCCTTCAT GGACAAGACC GAGGTCGGCC GCCTGATGTC GCGCCTGCAG GGCGACGTCA ACTCGATGCA GGAATTCCTC GAAACCTCGG TTCTCTCGGT CGGCGACATC GTGCTGCTCT TCGGCATTGT CTTCGTCATG CTCTATCTCG ATTTCAAGCT GGGGCTGCTG ACCCTCTCGG TACTGCCGGT GCTGTTCATC GTCCGCCTGT TCTGGCTGCC GCTCGCCCGC AAATCCTTCA TGGCCGCGCA CGAGACCAAT TCGGTGGCCA ATGGCGCGCT TGCCGAAGCC ATCCACGGGG TGCGCGCCGT CCAGAGCATG GACCGGCAGG GCGTCAACTT CACGCTTTAC GACGACAAGG CGCATGCCAA CCTCAGAACG CATCTGACGG CGGCGCGTTA TGCGCAGGTG ATGGTGCCGA TCGTCGACAG CCTGACGGGT GTGGCGATGG CGCTCGTCAT CGTTGTCGGC GGCGCCCGCG TTCTCAACCA GGCGCTCGAT GTCGGCGTGC TCGTCGCCTT TCTGTTCTAT ATTCAGCGCT TCTTCGACCC GATCCGTTCG CTGACCCTGC AATATTCGGT GATGCAGCGC GCCATGGCCT CGGGCCAGCG GCTGACCGAA GTGCTCGACG TGCCCGTCGA CATCAAGGAC GCGCCCGACG CCAAGACCCT GTCGCGCGAC ATGGACGGCT CGGTGGAATT CAAGGACGTC GTCTTCGGCT ACAATCCGAA ACATCCGGTG CTGAAACATG TGAGCTTCAA GGTCAATCCC GGCGAGACGG TGGCGCTTGT GGGTCCGACG GGGTCGGGCA AATCGAGCTG CATGTCGCTG ATCCACCGCT TCTACGACGT GCAGCAGGGC CAGGTGCTGG TCGGCGGCCA CGATGTGCGC GAGCTGACGC AGGATTCGCT CGGCGCGCAG ATCGCCATGG TGCTGCAGGA GCCCTTCCTC TTCACCGGCA CCGTCTTCGA AAACATCCGC TACCACAAGG CGGAGGCGAC GCGTGAACAG GTGATCGAGG CGGCCAAGGC GGTCGGCGCC CATGAATTCG TGATGCGCCT GCCCGATGGT TACGACAGCG TTCTCGGCGA ACGCGGCGGC AATCTCTCGC TCGGCCAGCG CCAGCTTTTG AGTTTTGCCC GCGCGCTGGT AGCGGATGCC AAGATCCTGG TGCTCGACGA GGCGACCGCC AATATCGACA GCTATACCGA GATGCTGATC CAGAAGGCGC TGGTGAAGCT GCTCGAAAAC CGCACCGGCC TCGTCATCGC CCATCGCCTG GCGACCATCC GCGAAGCCGA CCGCATCATC GTGCTGCAGA ACGGCGAAAT CATCGAGAGC GGCGACCACC GGCAATTGAT GAAGAACGGC AAGCTCTATT CCAAGCTCTA TAACCTCAAC TACGCCTCCT TCGATGATAT TCCCGAAGAC GTGCTGGAAG AAACTACCGC GACGCAATCG GCGACCTAA
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Protein sequence | MAEELETERP DVREDGRRPP RAVVGSHRVE EEMFGKAFDG NIVKRIWAFV HPYRRQVAWS VVAVLTFTMM QLLIPLIIRY AIDHGMSPGG SSSALIWSIA AFAIAISINY AASYAQETLV GGVAEDVLFD IRKAMFSHLQ RVSLSFMDKT EVGRLMSRLQ GDVNSMQEFL ETSVLSVGDI VLLFGIVFVM LYLDFKLGLL TLSVLPVLFI VRLFWLPLAR KSFMAAHETN SVANGALAEA IHGVRAVQSM DRQGVNFTLY DDKAHANLRT HLTAARYAQV MVPIVDSLTG VAMALVIVVG GARVLNQALD VGVLVAFLFY IQRFFDPIRS LTLQYSVMQR AMASGQRLTE VLDVPVDIKD APDAKTLSRD MDGSVEFKDV VFGYNPKHPV LKHVSFKVNP GETVALVGPT GSGKSSCMSL IHRFYDVQQG QVLVGGHDVR ELTQDSLGAQ IAMVLQEPFL FTGTVFENIR YHKAEATREQ VIEAAKAVGA HEFVMRLPDG YDSVLGERGG NLSLGQRQLL SFARALVADA KILVLDEATA NIDSYTEMLI QKALVKLLEN RTGLVIAHRL ATIREADRII VLQNGEIIES GDHRQLMKNG KLYSKLYNLN YASFDDIPED VLEETTATQS AT
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