Gene Rleg2_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5980 
Symbol 
ID6977366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011366 
Strand
Start bp396942 
End bp399656 
Gene Length2715 bp 
Protein Length904 aa 
Translation table11 
GC content62% 
IMG OID643393432 
ProductABC transporter related 
Protein accessionYP_002278250 
Protein GI209546360 
COG category[O] Posttranslational modification, protein turnover, chaperones
[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA GCCTCGCCCG CTACATCTGG AAGAACACGC GGCTGCAGCA GCTGTGGATT 
CTGGCTGTCG TCGCCGCCTC GATGGTGCCC TATTTCCTGT CCTTCGACCT GCCGAAGCAG
ATCGTCAACG GACCGATCCA GGGTGACGGT TTCGAAGGTC CCGGCGCAAG GCAGACCTTC
ATGCACATCG CCTACGACAT TCCGCTGATC GGCCATGTCG AATTCTTTCA AGGCTTGCAG
CTCAACCGCT TCCAGATGCT GATGGCCCTC AGCCTGGTGT TTCTGGCGCT GGTGGTGCTG
AACGGCCTCT TCAAGTTCTA TATCAACACC TATAAGGGCC GGCTCGGCGA GCGCATGCTG
CGCCGTATCC GCTTCGAACT GATCGACCGG GTGCTGCGTT TTCCGCCCAT CCACTTCAAG
CGGGTGAAAT CGGCCGAGAT CGCCACGATG ATCAAGGACG AGGTGGAGCC GATGGGCGGC
TTCACCGGCG ATGCCTTCGT CTCGCCTGCC CTTCTCGGCG GCCAGGCGAT CACCGCGCTC
GCCTTCATCA TCGTCCAGAA TTTCTGGCTC GGCATGATTG CCGCCGGCAT CGTCGGCGTC
CAGGCCATCG TCATTCCCCG CATGCGCAAG CGGCTGCTGG ATCTTGGCCG CCAGCGGCAG
CTGACGGCAC GCGAGCTTTC CGGCCGTGTC GGCGAAATCG TCGACGGCAT CGGCACGATC
CACGGCAACG ACACCTCCAA CCTCGAACGC GCCGACATCG CCTCGCGGCT CGGCCGGATC
TTTTCGATCC GCTACGACCT TTACCAGTGG AAGTTCCTGG TGAAGTTCAT CAACAACTTC
CTCGCCCAGG TGACGCCCTT CCTGTTCTAC GCGATCGGCG GCTATCTGGC GCTGCAGGGA
CGGCTCGACA TCGGCCAGCT CGTCGCCGTC ATATCAGCCT ATAAGGACCT GCCCGGGCCG
CTGAAGGAAC TGATCGACTG GGATCAGATG CGCCAGGACG TGCAGGTGAA ATACCAGCAG
GTCTACGAGC AGTTCAACGT CGAACCGCTG ATCGACAGCC GCATCCAGGA GCTGGCGACC
GCCCCCGTCG GCGCGCTGAC GAGCGCGCTC GTCGTCACCA ATCTCTCGCT TTCCGACGAC
AGCGGCGCCC GCCTCGTCGA CCACGTCTCC GTCGAGATCA AGCCGAACGA GACGGTGGCT
ATCGTCGGCC CGAACGGCAG CGGCGCGGAA GCCTTCGCCG AAGCGCTCGG CCGCATGGTC
TGGCCCGATT CCGGCCGCAT CACAATTGAT GGGCGCGACC TGCTGGATCT GCCGGAATCG
ATCACCGGCC GGCGCATTTC CTATGCCTCG GCCGATACCT TCTTTTTCCA TGGCACGCTC
GCCAGCAATC TGCTCTACGG CCTCAAACAC GCGCCGATGA CCGATCCCGT CTACGACGAG
AAGGAAGCGC TCGAATATAA GTGGCATTCC ATCGAGGCGG TGAAGGCCGG CAATCCGACG
CTCGATCTCA ACAGCGATTG GGTGGATTAC CAGGCAGCCG GCGCCAGCGG GCCGGAGGAT
CTGCTGAAAG CCATTCGGCC GGTGCTCGAC GCCGTGCTGA TCTCGCAGGA TATCCTCGAT
CTGGCGCTGC GCTCGACCGT CAACACCGAC GTGCATGTCG CGGTCAGCGA CCATGTCGTC
GCGCTGCGCG CCTCGCTGAG AGACCGGCTG CGCGACGAAG GGCTCGACGG GATCGTCGTG
CCTTTCGATT TCGACGCCTA TAACGCCCAG GCAACGGTCG GCGAAAATCT GCTCTTCGGC
ACGATGAAGC GGCCGCTGAT GACCAATCGC CGGCTTGCCG CCCATCCCTA TTTCCAGCAG
CTGTTTCGCG AGACGGGCCT CAGCACCGAT CTCTACGCCA TGGGCCTGGA GATCGCCGAG
AACGCCGTCG AACTCTTCCA CGATCTGCCG CCGGACCATC CGTTCTTCCA GCAGCTGACC
TTCATGACGG CCGACGACAT TCCGACCTAC CAGGCGCTGC TGCAGAAGCT GCAAAGCCGC
CGCTTCGAGG ATGCGACGCC CGAGGAACGT TCGGCCATCA TCCGGCTGAG CTTTGCCTAT
ATCGAGCCGC GTCACCGCTT CGGCCTGCTG ACCGACGAGC TGATGGACAA GATCGTCAGT
GCCCGCAAGC AGTTCCACGA GCATATTCCG GCCGATCTCG GCGAGCTGAT CGAGCGCTAC
GACGCCGAGC GGTTCACCCC GTCGGCAAGC CTGATGGACA ATGTGCTCTT CGGCCGCATC
GCCTATCAGC AGGCCGACGC CTCCGACCGC ATCCGCGCCA TCATGGGCGA ACTCTTCGAC
GCGCTCGATC TTTATGACGA TGTCCTGTCG ATCGGGCTGG AATTCGACGT CGGCTCCGGC
GGCAAGCGGC TGACCATGGT GCAGCGGCAG AAGCTGAACC TGGCGCGTGC GCTGCTGAAA
CGGTCAGACT ATTTCATCTT CAACCGGCCA TTGTCGGCGC TCGACCAGCG CGTCCAGGAC
CAGATCACCC GCAACATCGT TCAGGACCTG CACGAAGAAG GCCAGCGGCC GTCGATCATC
TGGGTGCTTT CCAATGCGCG CCTTGCCGAG ATGTTCGACC GGATCCTGCT CTTCGACCGT
GGCGGCTTGG CCGAAGCCGG AAACTATCCC GAACTTTCCG AGAAAAACGG GATGTTCAAG
GAACTGTTAT CGTAA
 
Protein sequence
MEKSLARYIW KNTRLQQLWI LAVVAASMVP YFLSFDLPKQ IVNGPIQGDG FEGPGARQTF 
MHIAYDIPLI GHVEFFQGLQ LNRFQMLMAL SLVFLALVVL NGLFKFYINT YKGRLGERML
RRIRFELIDR VLRFPPIHFK RVKSAEIATM IKDEVEPMGG FTGDAFVSPA LLGGQAITAL
AFIIVQNFWL GMIAAGIVGV QAIVIPRMRK RLLDLGRQRQ LTARELSGRV GEIVDGIGTI
HGNDTSNLER ADIASRLGRI FSIRYDLYQW KFLVKFINNF LAQVTPFLFY AIGGYLALQG
RLDIGQLVAV ISAYKDLPGP LKELIDWDQM RQDVQVKYQQ VYEQFNVEPL IDSRIQELAT
APVGALTSAL VVTNLSLSDD SGARLVDHVS VEIKPNETVA IVGPNGSGAE AFAEALGRMV
WPDSGRITID GRDLLDLPES ITGRRISYAS ADTFFFHGTL ASNLLYGLKH APMTDPVYDE
KEALEYKWHS IEAVKAGNPT LDLNSDWVDY QAAGASGPED LLKAIRPVLD AVLISQDILD
LALRSTVNTD VHVAVSDHVV ALRASLRDRL RDEGLDGIVV PFDFDAYNAQ ATVGENLLFG
TMKRPLMTNR RLAAHPYFQQ LFRETGLSTD LYAMGLEIAE NAVELFHDLP PDHPFFQQLT
FMTADDIPTY QALLQKLQSR RFEDATPEER SAIIRLSFAY IEPRHRFGLL TDELMDKIVS
ARKQFHEHIP ADLGELIERY DAERFTPSAS LMDNVLFGRI AYQQADASDR IRAIMGELFD
ALDLYDDVLS IGLEFDVGSG GKRLTMVQRQ KLNLARALLK RSDYFIFNRP LSALDQRVQD
QITRNIVQDL HEEGQRPSII WVLSNARLAE MFDRILLFDR GGLAEAGNYP ELSEKNGMFK
ELLS