| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg2_5468 |
|---|
| Symbol | |
|---|
| ID | 6978562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011368 |
|---|
| Strand | + |
|---|
| Start bp | 1115487 |
|---|
| End bp | 1116815 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643394568 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002279386 |
|---|
| Protein GI | 209547468 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.303073 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATCAT TTTTGAATCC GACGCGGAGA GGTTTTCTGG CGGGCACGGC CGCGCTTGGC
GCCAGCAGCA TGCTCGGCAT GCGCTCGGCA TCTGCTGCCG TCGACTGGAA GCGCTTCACC
GGCACCACGC TCGAGGTCAA TCTGGTCAAG AGCCCGCGCA GCGAAATACT CATGAAGTAC
CTGCCCGAAT TCGAGGAGCT CACCGGCATC AAGGTCAATG CCGAGGCGAC GCCCGAGCAG
CAGCAGCGCC AGAAAACGAC GATTGAGCTC AGCTCCGGCA AGCCGAGCTT CGACGTCGTG
CATATGAGCT ATCACGTCCA GAAGCGGCAG TTCGAGAAGG GCGGCTGGCT TGCCGATATC
GGCGGCTTCC TCAAGGATCC CGCGCTGACC GACCCGTCGC TGACGGAGGG TGATTTCGCC
GAAGCCGGCC TCGCCTTCGC CAAGGACGCC GGTGGCGCTC TGCGTTCTCT TCCCTTCTCG
GTCGATTACT GGATCATCTA CTGGAACAAG GCGCTGTTCG AAAAGAAGGG TCTTTCCTAC
CCGACGACGT TCGAAGAGCT GGCGAGTGCG GCCGAAGCCC TCACCGATCC GTCGACCAAC
ACCTACGGTT TCGTCGCTCG CGGACTGAAG AACGCCAACA CGCCGGTCTG GACGTCGCTG
CTGCTTGGTT ATGGTTCGAG CCCGCTCGGC CCTGACGGCA AGCTGCGCAC GACATCGCCG
GAAGCGATCG ATGCCGCCAA GCTTTATCAG AAGCTGATGA CCAAGACCGC CCCTCCCGGC
GTTTCCGGCT TCAACTGGGC CGAGGCCCAG TCGGCCTTTC TGCAGGGCAA GATCGGGATG
TGGCTCGATG GCGTCGGCTT TGCGCCGCCG ATCGAGAATC CGGAAAAGTC ACGCGTCGTC
GGCCAGGTCG GTTACGGCAT CATGCCGAAA GGCCCGAAGG CGCAGGCCGC GGGAACCTTC
GGCGACGGGC TTGGCGTCGT CGCGGCCAGC CAGAAAAAGG AAGCCGCCTA CCTCTTCTGC
CAATGGGCGA TTTCGCATGA CATGGGCGCC CGCCTGCTGC AGGCCGGTGC CGGCGTTCCG
TTCCGCCAGT CTGTCCTGGA GGATGCGAAA GTCCGCGAAG GCGTCAAGAT GCCTGGCGCG
TGGCTCGATG CCGTCGTCGG TTCTGGCAAG ATCTCGCAGC TCGCGCTGCC GGTCATCATT
CCGGTCACCG AGTTCCGCGA CATCTATGGC GTCGGTCTCA CCAATATGAT TGGCGGCGCC
GATCCGGAAG CCGAACTCAA GGCGGCGACG GCGCAGTTCG AACCCGTCCT GGCGAAAAGC
GAGGGATAA
|
|---|
| Protein sequence | MPSFLNPTRR GFLAGTAALG ASSMLGMRSA SAAVDWKRFT GTTLEVNLVK SPRSEILMKY
LPEFEELTGI KVNAEATPEQ QQRQKTTIEL SSGKPSFDVV HMSYHVQKRQ FEKGGWLADI
GGFLKDPALT DPSLTEGDFA EAGLAFAKDA GGALRSLPFS VDYWIIYWNK ALFEKKGLSY
PTTFEELASA AEALTDPSTN TYGFVARGLK NANTPVWTSL LLGYGSSPLG PDGKLRTTSP
EAIDAAKLYQ KLMTKTAPPG VSGFNWAEAQ SAFLQGKIGM WLDGVGFAPP IENPEKSRVV
GQVGYGIMPK GPKAQAAGTF GDGLGVVAAS QKKEAAYLFC QWAISHDMGA RLLQAGAGVP
FRQSVLEDAK VREGVKMPGA WLDAVVGSGK ISQLALPVII PVTEFRDIYG VGLTNMIGGA
DPEAELKAAT AQFEPVLAKS EG
|
|---|
| |