Gene Rleg2_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_5449 
Symbol 
ID6978543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011368 
Strand
Start bp1093128 
End bp1094249 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content62% 
IMG OID643394550 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002279368 
Protein GI209547450 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00647572 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCGACA TTGCCGTTAC AAATATTCAG CCGGATCGCG CCGCCGTCGC ATCGCAATGG 
CAGCTGATCT GGTGGGCTTT CCGCCGGCAC CGGCTGGCCA TGGTGGCGCT CGTCGTCACC
GTGATGATGT ATATCGTTGC CCTGGTGCCC GGCTTCTTCG CCATCAACGA TCCGAACCTG
CAGAATGCGC GGGCGACCTT TCACCCGCCG CAGAAACTGC ATCTGATCGA TACCGAGAAC
GGGTTTTCCT TCGGCCCGCA TTATTATCCG ATGAAGCTCA CCCGCGATCC GGAAACGCTG
GCCGCCATCT TCAGGGAAGA CACGACGAAG CGTGTCGACG TCCAGTTCTT CGGGCGCGGC
TATGAATATT CCGTGTTTGG CCTGTTCAAC ACAAACATCC ATCTGATCGC CTCGCCCGAC
AAGACCGCGC CGCTGCTTCT CTTCGGCGCC GACCGGCTAG GGCGCGACGT CTTCAGCCGA
ACGGTGCAGG GGTCGCAGGT TTCCCTATCG ATCGGTCTCG TCGGTGTCTT CCTGTCGTTG
ATGCTCGGCA TCGTGATCGG CGGCATCTCC GGCTATTACG GTGGCCGCAT CGATTTCTTC
ATGCAGCGGC TGATCGATTT CGTGCTGTCG TTGCCGACGA TCCCGATCTG GCTGGCGATG
GCCGCGGCGC TGCCGCAGGA TTGGCCGGCG ACGCTGCAAT ATATGATGAT CACGATCATC
CTGTCGCTGA CCGGCTGGGC GCAGCTCGCC CGCGTCGTTC GCGGCCGCTT CCTGTCGCTG
CGCACCGAGG AATTCGTCGC TGCCGCCAGG CTCGACGGCG TTCGCGAAGG ACGCATCATC
TTCCGCCATA TGCTGCCGAG CTTTGCCAGC CATATCATCG CGTCGATCAC CCTTGCGGTG
CCGGCGATGA TCCTTGCCGA AACCTCGCTT TCCTTCCTGG GGCTCGGGCT GCAGCCGCCG
ACCATCTCCT GGGGCGTGCT GCTGCGCGAG GCCCAGAACA TTCGTTCGAT CGCCACGGCA
CCCTGGCTCT TCATGCCGGG CTGCGCTGTC GTTGTTGCCG TGATGGCGCT CAACCTTCTC
GGCGACGGCC TGCGCGACGC GGCCGATCCC TACAACAAAT GA
 
Protein sequence
MADIAVTNIQ PDRAAVASQW QLIWWAFRRH RLAMVALVVT VMMYIVALVP GFFAINDPNL 
QNARATFHPP QKLHLIDTEN GFSFGPHYYP MKLTRDPETL AAIFREDTTK RVDVQFFGRG
YEYSVFGLFN TNIHLIASPD KTAPLLLFGA DRLGRDVFSR TVQGSQVSLS IGLVGVFLSL
MLGIVIGGIS GYYGGRIDFF MQRLIDFVLS LPTIPIWLAM AAALPQDWPA TLQYMMITII
LSLTGWAQLA RVVRGRFLSL RTEEFVAAAR LDGVREGRII FRHMLPSFAS HIIASITLAV
PAMILAETSL SFLGLGLQPP TISWGVLLRE AQNIRSIATA PWLFMPGCAV VVAVMALNLL
GDGLRDAADP YNK