Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5449 |
Symbol | |
ID | 6978543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | + |
Start bp | 1093128 |
End bp | 1094249 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643394550 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002279368 |
Protein GI | 209547450 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00647572 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCGACA TTGCCGTTAC AAATATTCAG CCGGATCGCG CCGCCGTCGC ATCGCAATGG CAGCTGATCT GGTGGGCTTT CCGCCGGCAC CGGCTGGCCA TGGTGGCGCT CGTCGTCACC GTGATGATGT ATATCGTTGC CCTGGTGCCC GGCTTCTTCG CCATCAACGA TCCGAACCTG CAGAATGCGC GGGCGACCTT TCACCCGCCG CAGAAACTGC ATCTGATCGA TACCGAGAAC GGGTTTTCCT TCGGCCCGCA TTATTATCCG ATGAAGCTCA CCCGCGATCC GGAAACGCTG GCCGCCATCT TCAGGGAAGA CACGACGAAG CGTGTCGACG TCCAGTTCTT CGGGCGCGGC TATGAATATT CCGTGTTTGG CCTGTTCAAC ACAAACATCC ATCTGATCGC CTCGCCCGAC AAGACCGCGC CGCTGCTTCT CTTCGGCGCC GACCGGCTAG GGCGCGACGT CTTCAGCCGA ACGGTGCAGG GGTCGCAGGT TTCCCTATCG ATCGGTCTCG TCGGTGTCTT CCTGTCGTTG ATGCTCGGCA TCGTGATCGG CGGCATCTCC GGCTATTACG GTGGCCGCAT CGATTTCTTC ATGCAGCGGC TGATCGATTT CGTGCTGTCG TTGCCGACGA TCCCGATCTG GCTGGCGATG GCCGCGGCGC TGCCGCAGGA TTGGCCGGCG ACGCTGCAAT ATATGATGAT CACGATCATC CTGTCGCTGA CCGGCTGGGC GCAGCTCGCC CGCGTCGTTC GCGGCCGCTT CCTGTCGCTG CGCACCGAGG AATTCGTCGC TGCCGCCAGG CTCGACGGCG TTCGCGAAGG ACGCATCATC TTCCGCCATA TGCTGCCGAG CTTTGCCAGC CATATCATCG CGTCGATCAC CCTTGCGGTG CCGGCGATGA TCCTTGCCGA AACCTCGCTT TCCTTCCTGG GGCTCGGGCT GCAGCCGCCG ACCATCTCCT GGGGCGTGCT GCTGCGCGAG GCCCAGAACA TTCGTTCGAT CGCCACGGCA CCCTGGCTCT TCATGCCGGG CTGCGCTGTC GTTGTTGCCG TGATGGCGCT CAACCTTCTC GGCGACGGCC TGCGCGACGC GGCCGATCCC TACAACAAAT GA
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Protein sequence | MADIAVTNIQ PDRAAVASQW QLIWWAFRRH RLAMVALVVT VMMYIVALVP GFFAINDPNL QNARATFHPP QKLHLIDTEN GFSFGPHYYP MKLTRDPETL AAIFREDTTK RVDVQFFGRG YEYSVFGLFN TNIHLIASPD KTAPLLLFGA DRLGRDVFSR TVQGSQVSLS IGLVGVFLSL MLGIVIGGIS GYYGGRIDFF MQRLIDFVLS LPTIPIWLAM AAALPQDWPA TLQYMMITII LSLTGWAQLA RVVRGRFLSL RTEEFVAAAR LDGVREGRII FRHMLPSFAS HIIASITLAV PAMILAETSL SFLGLGLQPP TISWGVLLRE AQNIRSIATA PWLFMPGCAV VVAVMALNLL GDGLRDAADP YNK
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