Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_5306 |
Symbol | |
ID | 6978400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011368 |
Strand | - |
Start bp | 936244 |
End bp | 937524 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643394410 |
Product | type III effector Hrp-dependent outers |
Protein accession | YP_002279228 |
Protein GI | 209547310 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.795374 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATTT TGCTCGGATC AATCGCCGAC GACTATACGG GCGCGTCCGA CCTCGCCAAT ACGCTGACGA AGAACGGTCT GCGCACGGTG CAGACGGTCG GCATCCCCGA TCCGTCGCTC GCTCTGCCTG ATGTGGACGC CGTCGTCGTT TCCCTGAAGA TCCGCTCCGT CCCGGCTTCG GACGCGGTGA CGGCCGCAAC CAGCGCCGAG CGATGGCTGC GCCAGCGGGG CGCGAGCCAT GTGCTCTACA AGATCTGTTC GACCTTCGAT TCCACCGATG CCGGCAATAT CGGGCCGGTC ACCAAGGCAT TGAGCGATGC GGCGGGCGGC GGCATCGTGC TGGTCACTCC AGCCTTCCCG GAAACGGGTC GCACCGTCTA TCTCGGACAT CTCTTCGTCG GCGGACAGCC GTTGAACGAA AGCCCGCTCA AGGACCATCC CCTCAACCCG ATGCATGACG CCAATCTGGT GCGGGTTCTC ACCCGGCAAT CACATGGCGC TGTCGAGCTG ATCGATCTCA CGGCCATCGC GGCCGGACCC GGCGTCGTCA AAGCGAGGCT CGAGGCCCTC AGCGCGGCCG GCGTCACCGC TGCCGTCGCC GATGCGATTT TCGAGCGGGA TCTTGAAACG CTCGGCGAGG TCGCATTGGA AACGCCGGTG TCCACCGGCG CCTCCGGGCT CGGCCTCGGC CTTGCCCGCG CGCTCGTCCG CTCCGGCCGG ATATCGTCCG GTGGCGCAGC CCCGACGGAT GCCATTCGCC CGGTGGGCGG ACTTTCCGCA ATCGTTGCCG GCAGTTGTTC CAAGGCAACG CTGCGCCAGC TCGAGGTCGC CGAGCGGTCG ATGCCCGTCC TGCGGCTCGA CCCGGAACGG CTGCTTGCCG GCCCGGATGA GATCACCGCG GCGATTTCTT GGGCCGGAGA CCGCATCGCC GCCGGCCCCG TCGTGATCGC CGCAAGCGCT GCACCCGAAA CCGTGGCCCG GCTGCAATCC CTTTATGGAC GGGAGGCCTC CGGCCAGGCG ATCGAGACCG CAACCTCGAT CATCGCCGCC GAACTGGTGG CAAGAGGCGT GCAGCGGCTC GTGGTCGCAG GCGGCGAAAC GTCGGGCGCA GCAGTTGACA GGCTCGCCAT TCCGGCATTT CTGATCGGAC CGGAGATTGC GGCCGGCGTG CCGGTGCTGC GCACGGTCGG CAATGCCCAG GGCGATATGC TTCTCGCTTT GAAATCAGGC AACTTCGGAG GCGAGGATTT CTTTGCGGCG GCGCTGGCGA TGATGCACTG A
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Protein sequence | MAILLGSIAD DYTGASDLAN TLTKNGLRTV QTVGIPDPSL ALPDVDAVVV SLKIRSVPAS DAVTAATSAE RWLRQRGASH VLYKICSTFD STDAGNIGPV TKALSDAAGG GIVLVTPAFP ETGRTVYLGH LFVGGQPLNE SPLKDHPLNP MHDANLVRVL TRQSHGAVEL IDLTAIAAGP GVVKARLEAL SAAGVTAAVA DAIFERDLET LGEVALETPV STGASGLGLG LARALVRSGR ISSGGAAPTD AIRPVGGLSA IVAGSCSKAT LRQLEVAERS MPVLRLDPER LLAGPDEITA AISWAGDRIA AGPVVIAASA APETVARLQS LYGREASGQA IETATSIIAA ELVARGVQRL VVAGGETSGA AVDRLAIPAF LIGPEIAAGV PVLRTVGNAQ GDMLLALKSG NFGGEDFFAA ALAMMH
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