Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg2_4356 |
Symbol | |
ID | 6983130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM2304 |
Kingdom | Bacteria |
Replicon accession | NC_011369 |
Strand | - |
Start bp | 4521856 |
End bp | 4522620 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643399084 |
Product | short chain dehydrogenase |
Protein accession | YP_002283840 |
Protein GI | 209551923 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.146165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGCT TGATCAACAA GGTCGCAATC GTCACCGGCG CAAGCTCCGG CATCGGCCGC GTCACAGCAA AACTCTTTGC CGCCGAAGGC GCCAAGGTCG TCGTCGGCGC CCGCCGCGAG CGCGAACTCG ACAGCCTCGT CGCGGAAATC AAGGCAGAGG GCGGCGACGC CATTGCTGTT GCCGGCGATG TCCGCTCCGA AGATTACCAC AAGGCGCTGG TCGCCGCGGC CGTGACCCAT TACGGCAAGC TCGACATCGC CTTCAACAAT GCCGGCATCA TCGGCGAAGC CGGCCCGAGC ACCGGTGTTT CGGAAGCAGG CTTCAGCGAG GCGCTTGATG TCAATCTCAC GGCATCCTTT CTCGCTGCCA AACATCAGAT CGGCGCGATG GCCGAAAATG GCGGCGGCTC GGTGATCTTC ACCTCGACCT TCGTCGGCTA CAGCTTCGCC TTTCCGGGCG TCGCCGCTTA TGCCGCCAGC AAATCCGGCC TGATCGGCCT GACGCAGGCG CTCGCCGCCG AATTTGGGCC GCAGGGTGTG CGCATCAACG CTGTCCTGCC GGGCGCGGTC GATACCGACA TGTATCGGGA CATGAACGAT ACGGCGGAGA AGCAGGCTGC CCTCAGCAGT ATGCATGCGC TGAAGCGTGT CGCGACGCCG GACGAGATTG CCCGCTCGGT TCTCTACCTC GCCTCCGACG ATGCGAGCTT CGTCACCGGC ACGGCTTCGC TGGTCGACGG CGGCATTTCG ATCACCCGCA GCTGA
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Protein sequence | MNRLINKVAI VTGASSGIGR VTAKLFAAEG AKVVVGARRE RELDSLVAEI KAEGGDAIAV AGDVRSEDYH KALVAAAVTH YGKLDIAFNN AGIIGEAGPS TGVSEAGFSE ALDVNLTASF LAAKHQIGAM AENGGGSVIF TSTFVGYSFA FPGVAAYAAS KSGLIGLTQA LAAEFGPQGV RINAVLPGAV DTDMYRDMND TAEKQAALSS MHALKRVATP DEIARSVLYL ASDDASFVTG TASLVDGGIS ITRS
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