Gene Rleg2_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg2_4356 
Symbol 
ID6983130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM2304 
KingdomBacteria 
Replicon accessionNC_011369 
Strand
Start bp4521856 
End bp4522620 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID643399084 
Productshort chain dehydrogenase 
Protein accessionYP_002283840 
Protein GI209551923 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.146165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCT TGATCAACAA GGTCGCAATC GTCACCGGCG CAAGCTCCGG CATCGGCCGC 
GTCACAGCAA AACTCTTTGC CGCCGAAGGC GCCAAGGTCG TCGTCGGCGC CCGCCGCGAG
CGCGAACTCG ACAGCCTCGT CGCGGAAATC AAGGCAGAGG GCGGCGACGC CATTGCTGTT
GCCGGCGATG TCCGCTCCGA AGATTACCAC AAGGCGCTGG TCGCCGCGGC CGTGACCCAT
TACGGCAAGC TCGACATCGC CTTCAACAAT GCCGGCATCA TCGGCGAAGC CGGCCCGAGC
ACCGGTGTTT CGGAAGCAGG CTTCAGCGAG GCGCTTGATG TCAATCTCAC GGCATCCTTT
CTCGCTGCCA AACATCAGAT CGGCGCGATG GCCGAAAATG GCGGCGGCTC GGTGATCTTC
ACCTCGACCT TCGTCGGCTA CAGCTTCGCC TTTCCGGGCG TCGCCGCTTA TGCCGCCAGC
AAATCCGGCC TGATCGGCCT GACGCAGGCG CTCGCCGCCG AATTTGGGCC GCAGGGTGTG
CGCATCAACG CTGTCCTGCC GGGCGCGGTC GATACCGACA TGTATCGGGA CATGAACGAT
ACGGCGGAGA AGCAGGCTGC CCTCAGCAGT ATGCATGCGC TGAAGCGTGT CGCGACGCCG
GACGAGATTG CCCGCTCGGT TCTCTACCTC GCCTCCGACG ATGCGAGCTT CGTCACCGGC
ACGGCTTCGC TGGTCGACGG CGGCATTTCG ATCACCCGCA GCTGA
 
Protein sequence
MNRLINKVAI VTGASSGIGR VTAKLFAAEG AKVVVGARRE RELDSLVAEI KAEGGDAIAV 
AGDVRSEDYH KALVAAAVTH YGKLDIAFNN AGIIGEAGPS TGVSEAGFSE ALDVNLTASF
LAAKHQIGAM AENGGGSVIF TSTFVGYSFA FPGVAAYAAS KSGLIGLTQA LAAEFGPQGV
RINAVLPGAV DTDMYRDMND TAEKQAALSS MHALKRVATP DEIARSVLYL ASDDASFVTG
TASLVDGGIS ITRS