| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4403 |
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| Symbol | |
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| ID | 3960017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | - |
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| Start bp | 169220 |
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| End bp | 170647 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637909611 |
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| Product | Type II secretory pathway component PulD-like |
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| Protein accession | YP_516087 |
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| Protein GI | 89885889 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1450] Type II secretory pathway, component PulD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAGGC AATTGACCGT TGCGCTGTTG GTGGCGAGCA GCGCCTTCAT GGCGGGCTGT
GCTCAGCTTC CAGAGGCAAC AGGAGACACC ACAGGCAACG TCGGCGCATC GGGTCCTATA
GCGCCCGCAC CGGAAATCTC CGTCGTCGAC CGCTCCCCCG ACAGAACCAG GAACATTGGC
AAAGAGGAGC TGTTCATCGC GCAGCCACTG CAGAGCAGTG ATCCTATGCC ACGGATCAAC
ATAGAGAACG TAACCATATT GAGCAGTCGG GTCTATGAGC TGATGCGCAC CCTGCTTGAT
GGAAAGAATA TTTCGTTTTC AATTTCCGGC GTCAACAGCA AAGTTATGCG CCGCCATGTG
TCAGCGTCCA ACATCACGGG TGATCTAGAG CAGATTCTTG ACGATTTTGC CAATTCGGTC
GGGTTCTACT GGCATTACAA GGGAGGGACA CTGCACATAG CGCCTGACCG CCAGTACATC
GCCACGATTC CCCCCATTGA CGACGTGTAC GAAAGCATGC CCCCCATGCT GCAATCCATG
GGTGCGATTG ACGTGTTTGT CGATCGGACA TCACACCTGG TGACCTACAG CGCCAACAGG
GAGGCCTCAG AGAAGATAGA TGGCTACCTC AAGCACATTC GTGACAACAA GAAAATGATT
TCTTACGATG TGTACGTCTG GCAGGTCGAA CTCGATGGGG ACCACAAGAA CGGTATTCGG
TGGGAAAAGC TCGACGAGGA AATCGCTTCC AAAAGAGGGG TTAAACGCCA GGCCGCATCC
AGTGATGCCA AATTGGGAGC CGGCTTCAGT TCGACCTTCG GGCGCGGCGA GTTGCCGATT
GATGTGCTTT CGAGTTTTCT GTCGGCCCAG GGAAAGATTC ACGCTATTTC GCAACCGAAA
ATGGCAATGA TCAGCGGTGG CAAAAGCACC TTTCGGATCG GCAACACCAC GGTGTACGCC
AAGCAAGTCG GAACCGATTC GAGTTCGGGA GTGAACAAGA CCACAGTGAC TACCGCGCAG
GCGTTGTCGG GAATCGAGTT GACGGTGGTT GGCAATCTGG ATGGCGAGAC GGTCTATACC
GACATCCAGA TGAAACTCAA CGACTTGCTC AGGTTCAACT CCTTCAGCGC CAACGGTATC
TCCCTGCAAT TGCCCCAAAA CGCAAATCGC GAACTATCGA CCCTTGCGCG GATTCGTCCA
GGCAACTCTC TCTTGCTGGC GGGGATAAAC ATCAGCAGAA CCGACGATAG CCGCACCGTA
AAAGACGCTC GCGAGAAGAA CTCGATGACC TTGCCAAATA GCATGTATGA AACCGAACAG
AGAACAGAAC TTGTGTTGGT TTTTTCCCCC AATGTTTACT CCTTCATTAA CGAAGGCGTG
AATTCCAAGA CCAATGCTGA CCTTCAGGCC TATCAAAATG AAAAATGA
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| Protein sequence | MHRQLTVALL VASSAFMAGC AQLPEATGDT TGNVGASGPI APAPEISVVD RSPDRTRNIG
KEELFIAQPL QSSDPMPRIN IENVTILSSR VYELMRTLLD GKNISFSISG VNSKVMRRHV
SASNITGDLE QILDDFANSV GFYWHYKGGT LHIAPDRQYI ATIPPIDDVY ESMPPMLQSM
GAIDVFVDRT SHLVTYSANR EASEKIDGYL KHIRDNKKMI SYDVYVWQVE LDGDHKNGIR
WEKLDEEIAS KRGVKRQAAS SDAKLGAGFS STFGRGELPI DVLSSFLSAQ GKIHAISQPK
MAMISGGKST FRIGNTTVYA KQVGTDSSSG VNKTTVTTAQ ALSGIELTVV GNLDGETVYT
DIQMKLNDLL RFNSFSANGI SLQLPQNANR ELSTLARIRP GNSLLLAGIN ISRTDDSRTV
KDAREKNSMT LPNSMYETEQ RTELVLVFSP NVYSFINEGV NSKTNADLQA YQNEK
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