| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4328 |
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| Symbol | |
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| ID | 3959864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007901 |
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| Strand | - |
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| Start bp | 92545 |
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| End bp | 93786 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637909535 |
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| Product | phage integrase |
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| Protein accession | YP_516012 |
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| Protein GI | 89885814 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCGG AAATCGCGCG CTCTGATGGC TTTGATTTCC AGCTTCCGGC CGTAGGTCAG
GGCAACGCCC CGATCTCAGC GGATGCCCAG GCGATGGGGC AGTGGCTGGC GATTTACAAG
CTGCGCAGTC CGAACACATT CAGAACCTAT TTCAAGGAGG GCAAGCGCTG GCTGGCGTGG
CTCGAATTTC GACGTGGACC TACTCAGTCA TCACACCTTC AAGTAGCTTC AGAAGACGAC
GTACAGACCT ACCTTCTGGC CCTGGGCCGC CCGGAAGACA AGCGAGGCTC CGAGGACCAA
CCGTTCCAAC CTACCGTCCT TCCTGGGCAC TTGCTGACCA AATATCGGCT GACCAGCCAG
CCTTTCCTGA AAGAGCATCT TCCCCGTTCC ATGGCGCATG CGCTGTCTTC GGTTTCGGCG
CTTTATACGT TTCTTGGCAA GTCCATCGAT TCCGGGAGCG AAGCCTACGT CAGACACAAC
CCTACGTTGC GGTTGTCACG GCTAATGGAC CACCGCGTCC ACAAGGTATC GCGTCATTTT
TCACCGCGCG TGTACGCCGA AATGCTTGTG ACCATCGAAA TATCCAGACT CGAAGCCACA
GACAAAGAGA AGTTGTTGCG AGCGGCCCGC CGGCGCTGGA TCATTGTCAT GCTCTACGGG
TTATGGATCA GGCTGGCCGA GGCGTCGTCG ATCAAGATGT CCTCCTTCAA GAAGCATCAC
AACATCTGGA CCCTGACCGT CGTTGGGAAA GGCCGCAAAG AACGATCCTT CGAAGTAACC
AGCGGTGTGA TCATGGAGCT GAGCCAATAC CGGATGCATA ACGAGCTGCC GTCCCTCCTT
GCTGTCATGG AGGATCAGCC GGCTATTCTC CCGATCCGGC CTGGCAAAGG CCGCACTCCG
AACAAGCCTT GCACCTCGAC TTCCATCTAC CGCGAGGTCA AGCTCGTCGC AGAGGCCACC
GCCGCGCGCC TCGAGCGCGA AGGCACTGAA CTTCCGCTGG ACGAGCATGA ACAACTGATT
GAGAGCATCC GCAACATTTC ACCGCACTGG TTCAGACACA GCGGTGCCTC TGAGGCCATC
AATGCCGAGT ACCCGATCAG GGATGCTGCC GACCGCTTGG GCCACGCCAG CATCAACACC
ACTTCACAGA TGTATCACCA CGCTGATAAT CGTAAAAGGC GCGATGCTCT CGAACGCATT
GAAGACAACC GCACCAAGGA ACCCGGCGAG TTCTATCTCT GA
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| Protein sequence | MNSEIARSDG FDFQLPAVGQ GNAPISADAQ AMGQWLAIYK LRSPNTFRTY FKEGKRWLAW
LEFRRGPTQS SHLQVASEDD VQTYLLALGR PEDKRGSEDQ PFQPTVLPGH LLTKYRLTSQ
PFLKEHLPRS MAHALSSVSA LYTFLGKSID SGSEAYVRHN PTLRLSRLMD HRVHKVSRHF
SPRVYAEMLV TIEISRLEAT DKEKLLRAAR RRWIIVMLYG LWIRLAEASS IKMSSFKKHH
NIWTLTVVGK GRKERSFEVT SGVIMELSQY RMHNELPSLL AVMEDQPAIL PIRPGKGRTP
NKPCTSTSIY REVKLVAEAT AARLEREGTE LPLDEHEQLI ESIRNISPHW FRHSGASEAI
NAEYPIRDAA DRLGHASINT TSQMYHHADN RKRRDALERI EDNRTKEPGE FYL
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