| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_4220 |
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| Symbol | rpsM |
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| ID | 3961938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 4694474 |
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| End bp | 4694839 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637919034 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_525438 |
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| Protein GI | 89902967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.624701 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCTGGCAT CAATATTCCG CCGCAACAGC ATTCAGAGAT TGGCTTGACT
GCCATATTTG GAGTTGGTCG CAACCGCGCT CGCAAAATTT GCGATGCTTG TGGCATCGCT
TACTCCAAAA AGGTCAAGGA TTTGACCGAT TTGGAGCTGG AAAAAATTCG CGACCAGGTG
GCGCAATTTA CCATTGAGGG TGATTTACGT CGGGAAACAA CGATGAACAT CAAGCGATTG
ATGGACATCG GTTGCTACCG AGGTTTCCGT CATCGTCGCG GTTTGCCCAT GCGTGGTCAG
CGTACACGCA CAAACGCCCG CACCCGCAAG GGGCCGCGCA AGGCGGCCCA GTCACTGAAG
AAATAA
|
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| Protein sequence | MARIAGINIP PQQHSEIGLT AIFGVGRNRA RKICDACGIA YSKKVKDLTD LELEKIRDQV
AQFTIEGDLR RETTMNIKRL MDIGCYRGFR HRRGLPMRGQ RTRTNARTRK GPRKAAQSLK
K
|
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