Gene Rfer_4129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4129 
Symbol 
ID3961827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp4604916 
End bp4605521 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID637918953 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_525358 
Protein GI89902887 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGAAC CCGAGGCCGC CTATCCCAAC CTTGACGCAT TGCTGACGGC GGTGCGCAAT 
TGCCGTGCGT GTGAGTCGCA TCTGCCGCTT GGTCCTCGTC CGGTGCTGCG AGCGGGTGAG 
GCGGCGCGTA TCCTCATCGT GGGGCAGGCG CCCGGTGTGC GCGTGCACAC GACCGGTATC 
CCATGGGACG ACCCGAGCGG GGAGCGTCTG CGCGCATGGA TGGGTGTGGA CAAAGCGCTC 
TTCTATGACG AATCGCGCAT CGCCATCATT CCCATGGGTT ATTGTTATCC GGGGCGCGCA 
AGGGGTGGTG ATTTACCGCC GCGTCGTGAA TGTGCGGCGC TTTGGCTTGA CCAGTTGCTG 
TCCCGGATGC CGCGGATTGA ATTGACTCTG CTGGTCGGTC AGTATGCGCA GCACCATTTT 
CTGGGTAGCC GCCGCAAACC GTCACTGACC GAAACAACGA TGGCCTGGCG GGAGTACGCG 
CCGCGATTCA TCCCGCTGCC GCACCCTTCG CCGCGCAACC AACCCTGGTT CAAGCAGCAC 
GCCTGGTTTG AGGAGGACGT GGTACCCGCG TTGCAGGCAC GCATCAACGC CATGATCGCC 
CGCTGA
 
Protein sequence
MAEPEAAYPN LDALLTAVRN CRACESHLPL GPRPVLRAGE AARILIVGQA PGVRVHTTGI 
PWDDPSGERL RAWMGVDKAL FYDESRIAII PMGYCYPGRA RGGDLPPRRE CAALWLDQLL 
SRMPRIELTL LVGQYAQHHF LGSRRKPSLT ETTMAWREYA PRFIPLPHPS PRNQPWFKQH 
AWFEEDVVPA LQARINAMIA R