| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3861 |
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| Symbol | |
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| ID | 3961463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 4310236 |
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| End bp | 4311465 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637918686 |
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| Product | peptidoglycan-binding LysM |
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| Protein accession | YP_525091 |
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| Protein GI | 89902620 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA ACCTGATGCC AAAGTCCACC GCCGCCGCCA AAGTCATTGG GGTCACCCTG
GCGGTGCTGA CCGCCAGCTT GGCCACCGCG CCAGCTTGGG CCCAGAATTT CCCGATCACG
GCAGGGCAAA AGGCGACCGC GACGCAGGTC GCGCAGGCCG GCGTGCCCTT GAGCGAACTG
GCGGCCAATG CGCCCGACAG CTATACCGTC AAACGCGGCG ACACGTTATG GGCCATCTCC
GGCATGTTCC TGAAAAGCGC CTGGCGCTGG CCCGAATTGT GGGGCATGAA TTTGGCTGAC
ATCCGCAACC CCCATCGGAT TTACCCGGGG CAAACGCTGT ATCTGGAGCG CCAGGGCGGG
CGCGCCACCC TGCGCACTCG CCAGTCTGGC GCCGATGCGG CGGCGCTGAC GACCGTGCGC
CTGTCGCCAC GCACCCGAAT TGAACAGCTG GCGGACGACG CCCTGCCGAC GCTCAAAAGC
CACTTGATCG AACCGTTTCT GGCCGAGCCG GTGATCGTGG ACGAGAACGG CCTGGCCCTG
GCGCCGCGCA TTGTGGCGGC GCAGGAGGGC CGTGTGTTGC TGACCCGGGG TGACCGGGCC
TACGCGCGCG GCCAGGGTGA CGCGGTGCTG ATCGATGAAC CGACGCAAAA GCAGAAAGCG
TACCGGGTGT TTCGCAATGC CACGCCATTG AAAGACCCGG TCACCGCTGA AGTTCTGGGC
TATGAGGCGC AGTACGTGGG CAAGGCGCTG CTGGTGCGCG GCGAATCCAC CCAGGCCTCG
GTTGACAAGG ATGGCAAACC CCGCACCGAC ATCATCCCGG CCACGCTTGA CATTGTGGCG
GCCAAGGAAG AGATGCGCGT TGGCGACCGG CTGCTGCCCG AGCCACCGCA ACAGTTGTTG
AGCTACGTGC CGCACGCACC CCAGGGGCCA GTCAACGCCC GCATTGTCTC GGTCTATGGC
AGCGCGGTGG TCAACGCAGC GCAGAACCAG GTCGTGGCGA TCAATCTGGG CACGCGCGAC
GGCATCGAAA GCGGGCACGT CCTGGCGATC CTGAAAGACG GTGCGCGCCT GATCGACAAG
ACCGATGCGG CGCGCCCCGA GCTGAAGTTG CCCGATGAAC GCAATGGTCT GCTGATGGTG
TTTCGCCCCT TCGAGAAACT CTCGTATGCG CTGGTGCTCG ACATCACGGA TGGCGTCAAA
GTCGGCGACC GGCTGGTCAA CCCGCGCTGA
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| Protein sequence | MTQNLMPKST AAAKVIGVTL AVLTASLATA PAWAQNFPIT AGQKATATQV AQAGVPLSEL
AANAPDSYTV KRGDTLWAIS GMFLKSAWRW PELWGMNLAD IRNPHRIYPG QTLYLERQGG
RATLRTRQSG ADAAALTTVR LSPRTRIEQL ADDALPTLKS HLIEPFLAEP VIVDENGLAL
APRIVAAQEG RVLLTRGDRA YARGQGDAVL IDEPTQKQKA YRVFRNATPL KDPVTAEVLG
YEAQYVGKAL LVRGESTQAS VDKDGKPRTD IIPATLDIVA AKEEMRVGDR LLPEPPQQLL
SYVPHAPQGP VNARIVSVYG SAVVNAAQNQ VVAINLGTRD GIESGHVLAI LKDGARLIDK
TDAARPELKL PDERNGLLMV FRPFEKLSYA LVLDITDGVK VGDRLVNPR
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