| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3845 |
|---|
| Symbol | |
|---|
| ID | 3961447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 4292333 |
|---|
| End bp | 4293658 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637918670 |
|---|
| Product | anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| Protein accession | YP_525075 |
|---|
| Protein GI | 89902604 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
|---|
| TIGRFAM ID | [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTT CAATTGTTCT TCAATTCCTG GTCGTGTTAG CGGCCATCTG GATGGGGGCA
CGATCCTCGG GCATTGGTCT GGGTTTGTGG GGCGCGGTGG GTCTGATGGT GCTGGTCGGT
GCCTTTGGCC TCACGCCAAC GTCGCCGCCG ATCGATGTGA TGCTGATCAT CCTGGCCGTC
ATCATGGCCG CGTCTGTCAT GGAAGCGGCT GGCGGCATCG ACTTTCTGGT CGGGATCGCC
GAGCGCATCA TCCGGGCCAA TCCGAAGTAC GTGACGATCG TCGCGCCACT CACGACCTGG
ACCTTCACCT TCCTCGCCGG AACGGGGCAC ATCGTCTATC CGCTGCTGCC GGTGATCTAT
GAGACGGCGC ACCGCAGCGG CATCCGTCCG GAACGACCGA TGGCGGTGGC CACCATCGCC
TCGCAGCAGG CCATCACCGC CAGCCCGGTT GCCGCGGCCA CGGCGGCCAT GATCGGCATG
TTTGCCGAAA AGGGCATGAC GGGCTGGGGA CTGCGTGAGA TCCTGATGAT TTGCGTGCCC
GCCACGCTCG TCGGCGTCAT CGCCGCAGCC ATCGTTTCCA TGTTCATCGG CAAGGACCTG
AAGGACGACA AGGTGTACCA GGCGCGGCTC GCCGCCGGCG AGATACCGGC GCCCCAATCG
GCCGCTGGGC GCCCGGCGCT CAAGCCGACG GCGAAACTGG CTGCGTTTGT CTTCCTGAGC
GGTGTTGCAT TGGTCGTGCT GTTCGGCTTC TTCCCGGCAC TGCGGCAACT GCCCGGGGCA
AAAAGCCCGC TGTCCATGCC GATCGTCATC GAAATCATCA TGATGTCCAT CGCTGCGATC
ATGCTTTTGC TGACCCAAGT CGCTGTTGAC GATGTTCCCA AGACCGCCAC CTTGCGTGCC
GGCGTGGTCG CGGTCATCGG TATTTTTGGC CTGGCCTGGC TCGGCGACAG TTTCATTTCC
GCCAACAAGG ACTTGATTGT TCCAGCCATC GGCGAATGGG CGAAGGTCGC GCCCTGGACC
TTTGCCTTCG GTCTGTTCCT GGCCTCGGTG TTGCTTTACA GCCAGGCTGC AACCACCCGT
GCGCTGATGC CGCTTGGGGT GGTATTGGGT ATCCCGCCCC AGTTCCTGAT CGGTATGTTT
CCGGCGGTCA ATGGCTACTT CTTCATTCCC ACCTATGGTT CACTGATTGC AGCGATCAAC
TTCGACTTGT CCGGAACCAC CAAAATTGGA CGCTACGTTC TGAACCACTC GTTCATGATT
CCCGGACTGG TGGCCACGGC GGTGTCGGTC GCGACCGGGC TGCTGATCGC ACGCATGATT
TTCTGA
|
|---|
| Protein sequence | MTVSIVLQFL VVLAAIWMGA RSSGIGLGLW GAVGLMVLVG AFGLTPTSPP IDVMLIILAV
IMAASVMEAA GGIDFLVGIA ERIIRANPKY VTIVAPLTTW TFTFLAGTGH IVYPLLPVIY
ETAHRSGIRP ERPMAVATIA SQQAITASPV AAATAAMIGM FAEKGMTGWG LREILMICVP
ATLVGVIAAA IVSMFIGKDL KDDKVYQARL AAGEIPAPQS AAGRPALKPT AKLAAFVFLS
GVALVVLFGF FPALRQLPGA KSPLSMPIVI EIIMMSIAAI MLLLTQVAVD DVPKTATLRA
GVVAVIGIFG LAWLGDSFIS ANKDLIVPAI GEWAKVAPWT FAFGLFLASV LLYSQAATTR
ALMPLGVVLG IPPQFLIGMF PAVNGYFFIP TYGSLIAAIN FDLSGTTKIG RYVLNHSFMI
PGLVATAVSV ATGLLIARMI F
|
|---|
| |