Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3549 |
Symbol | |
ID | 3961141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3948374 |
End bp | 3949093 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637918365 |
Product | cyclic nucleotide-binding domain-containing protein |
Protein accession | YP_524785 |
Protein GI | 89902314 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGC CGCGGGGCCC CACTCAAAAC CACCTTCTCG CGGCCCTGCC GGCCGCTGAG TTGGAGCGCA TCGCGCCCCA ATTGGAGTTG GTTCCCATGT TGCTGGGCGA CGTGCTTTGT GAATCCGGTG GCCAGTTGCA GCACGTCTAT TTTCCAGCCA CGGCCATTGT GTCGCTCCAA TACACGACGG AGGATGGCGG CTCGGCCGAG ATCGCGGGGG TGGGCAATGA GGGCATGCTC GGCGTTTCGC TGTTCCTGGG CGGCAACAGC ACGCCCCACT GCGCCACGGT GCAGACGGGT GGTAGCGGTT ACCGGCTGAA AACGCACTTG CTGCTGGAAG AATTCAATCG GGCTGGCCCG ATGATGCGTT TGCTGCTGCG CTACACCCAG GCCTTGATGA CGCAGATGTC CCAAACCGCA GTCTGCAATC GGCACCATTC GGTGGAGCAA CAGTTGTGCC GCTGGCTGTT GGCAACGCTG GATCGTTTGC CCTCGACTGA GCTGACCATG ACGCAGGAAT TGATTGCCAG CATGATCGGC GTTCGCCGTG AAGGCATCAC CGCCGCTGCC GGGCACTTGC AGCAAGCGCA GTGCATTCGC TACCGCCGCG GCCACATCAC GGTGCTTGAC CGCCAGGGCT TGGAGTCGCG CGTGTGTGAA TGCTACGGCG TGGTGAAAAA TGAATACGAT CGTTTGCTGG GCGATGTTCG CCAGCGCTAA
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Protein sequence | MDLPRGPTQN HLLAALPAAE LERIAPQLEL VPMLLGDVLC ESGGQLQHVY FPATAIVSLQ YTTEDGGSAE IAGVGNEGML GVSLFLGGNS TPHCATVQTG GSGYRLKTHL LLEEFNRAGP MMRLLLRYTQ ALMTQMSQTA VCNRHHSVEQ QLCRWLLATL DRLPSTELTM TQELIASMIG VRREGITAAA GHLQQAQCIR YRRGHITVLD RQGLESRVCE CYGVVKNEYD RLLGDVRQR
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