Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3541 |
Symbol | |
ID | 3960408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3937249 |
End bp | 3938031 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637918357 |
Product | ABC transporter related |
Protein accession | YP_524777 |
Protein GI | 89902306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAAA AAATAGGTGA TGTCGTTCTT GACGTCAAGA ATATTTCTCT CAGTTTCGGC GGCGTCAAGG CGCTGACTGA CATTTCATTT GATGTGCGCG AGCACGAGGT GCGCGCCATC ATCGGCCCCA ATGGCGCGGG CAAGAGCTCC ATGCTCAATT GCATCAACGG GGTCTATACG CCCCAGCAAG GCTCCATCAG TTTTCGCGGC AAAACCTTCA GCCACATGGA CAGCCACGCG GTTGCCGCGA TGGGTATCGC GCGCACCTTT CAAAACCTGG CGTTGTTCAA GGGCATGAGC GTGATTGACA ACATCATGAC CGGGCGCAAC CTGCGGATCA AGAGCAATCT GTTTTTGCAG GCGCTGCGCA TCGGCCCGGC CCAGCGCGAG GAAGAAAAGC ACCGCGAATT TGTCGAACAC ATCATCGATT TTCTCGAAAT CCAGGCGCAT CGCAAGACGC CGGTCGGGCA GTTGCCTTAC GGTCTGCAAA AACGCGTCGA CCTGGGCCGG GCGCTGGCGA TGGAGCCGCA GGTGCTGCTG CTCGACGAGC CGATGGCCGG CATGAACGTG GAGGAAAAGC AGGACATGTG CCGCTTTGTG CTCGACGTCA ATCAGGAATT TGGCACCACG GTGGTGTTGA TTGAGCATGA CATGGGGGTG GTGATGGATA TCTCAGACCG CGTGGTGGTG CTGGACTACG GCAAGAAGAT TGGCGACGGC ACGCCCGATG AAGTGCGTAA CAACGAAGAA GTGATCAGCG CCTATCTTGG AACGGGACAT TAA
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Protein sequence | MSKKIGDVVL DVKNISLSFG GVKALTDISF DVREHEVRAI IGPNGAGKSS MLNCINGVYT PQQGSISFRG KTFSHMDSHA VAAMGIARTF QNLALFKGMS VIDNIMTGRN LRIKSNLFLQ ALRIGPAQRE EEKHREFVEH IIDFLEIQAH RKTPVGQLPY GLQKRVDLGR ALAMEPQVLL LDEPMAGMNV EEKQDMCRFV LDVNQEFGTT VVLIEHDMGV VMDISDRVVV LDYGKKIGDG TPDEVRNNEE VISAYLGTGH
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