Gene Rfer_3508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3508 
Symbol 
ID3963358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand- 
Start bp3899720 
End bp3900403 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content63% 
IMG OID637918324 
ProductTetR family transcriptional regulator 
Protein accessionYP_524744 
Protein GI89902273 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343043 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGTTC CAGCCTCACC CATTAATCAC GAATCCGGGC TGCTGGCCCA CCCTGCCCCC 
AAGCGCGCTC GCGGGCGCCC GCGCAAGACC GAGGACGAGC GCGACGACGG GAACCGGCGG 
CATCAATTGC TCACCGCAGC CGCCCGGCTG TTTCGTGACA AAGGCTTTGA TGCCACCAGC 
ACGCGCGACA TCGCAGCTGC CGTCGGCATG CACAGCGGCT CGCCTTTTTA TCACTTCAAA 
AGCAAGGATG CGCTGCTGCT GGCGGTGATG GAGGAGGGCA TGCGCTCGGC CCTGGCGCGC 
CAGGCCGATG CACTGCATGG TCCAGCGTCA GCGTCAGCGG CAAGTGGACC CCTGGTGCAG 
ATCCGGCGCC TGATCCGGGC CCACTTCGAC ACATTGCTGG GGCCGGGCAA CGATTTCATC 
CCTGTGATGC TGTATGAACA TCGGTCCTTG AATGCGCGCC AGCGTGCGTC GCTGGCCATG 
CTGCAAGTGG CCTACGAATC AGCCTGGACG CCGGTGCTCG AAGCCCTGCA CGCGAGTGGC 
CATTTGCGTG CCCCGGTGAA GCTCTCAAGG TTGTTGATTC TGGGCGCGCT GAACTGGTCG 
GTGCAGTGGT TCGATGAAAA AAAAGGCGCG TCGCTGGATG AATTGGCCGA TGCCGCCATG 
GCTTTGTTTT TGAAGGAATC CTGA
 
Protein sequence
MTVPASPINH ESGLLAHPAP KRARGRPRKT EDERDDGNRR HQLLTAAARL FRDKGFDATS 
TRDIAAAVGM HSGSPFYHFK SKDALLLAVM EEGMRSALAR QADALHGPAS ASAASGPLVQ 
IRRLIRAHFD TLLGPGNDFI PVMLYEHRSL NARQRASLAM LQVAYESAWT PVLEALHASG 
HLRAPVKLSR LLILGALNWS VQWFDEKKGA SLDELADAAM ALFLKES