| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3492 |
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| Symbol | |
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| ID | 3963211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3883836 |
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| End bp | 3884843 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637918309 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_524729 |
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| Protein GI | 89902258 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.312033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATCCA CCGTTTTGAT TCTGGGTGCA CGCGGACGTT TCGGTCTGGC TGCCGCCCGT
GCTTTTACCG ACGCCGGCTG GTGTGTGCAG GGCCTGATGC GCCCCGGCGC ACAAGTGCCC
GCCGAGGCCA AAAATGACAA CCGCATCAAG TGGGTGAGCG CTGACCTGCA AGACACCGCC
GCTGTGGCCC GTGCCGCCCA GGATGCCTGC GTGGTGGTGC ATGCCCTGAA CCCGGTGTAC
ACCCACAAGG CATGGAAGGC GCAGGCGCTG CCCATGACTG AAGCGGCCAT CGACATCACC
CGTGCGCTCA ATGCCACCTT GATGTTCATG GGCAACATCT ACAACTTCGG TGCGGACATG
CCTGCCGTCG TGTCGGAAGA CACGCCGCAG CGGGCCAGGA CCGTCAAGGG CCAGATCCGC
ATCGCCATGG AAGAGCAGAT TCGCCGAAGT GGTGTGCGCG CCATCGTGAT CCGTGCCGGA
GACTTTTTCG GCAGCGGCAA AGGCACCTGG TTTGACCAGG CCATTGTCAA AGGCATTCAG
AAGGGCAAGT TCACCTACCC TGGCCACAAA GGCGTGGCCA CGGCCTGGGC TTACTTGCCG
GACCTGGCCC GCACCTTTGC AGAAGTGGCC GCACGCCGCG ACACTCTCAA GGCATTCGAA
GTCTTCCACT TTGCAGGCCA CCGCATCACC GGTCAGCAGT GGCTGGATGC GATCCAACCC
ATCGCGCAAG CCCAGGGGTG GGTGAAGCCC AACGCCGCTT TGCAATACAG CCAGTTTCCA
TGGCCCATCA TCCGCATCGG CGCGCTGTTT GTCCCAACCT GGGCGTCGCT GCTGGAGATG
CGCTACCTGT GGGACAAAGC GCATGCACTG GACAACCGCA AGCTGGTGGC ACTCTTGGGT
GCAGAGCCGC ACACTGCCTT GGCGCAAGCC GTGACCATGA CACTGAAAGA CCTGGGTTTC
ACCAAAGACG CTGTTGCAGC GCAAGCCACT CTCGTGTCGG CACGCTGA
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| Protein sequence | MQSTVLILGA RGRFGLAAAR AFTDAGWCVQ GLMRPGAQVP AEAKNDNRIK WVSADLQDTA
AVARAAQDAC VVVHALNPVY THKAWKAQAL PMTEAAIDIT RALNATLMFM GNIYNFGADM
PAVVSEDTPQ RARTVKGQIR IAMEEQIRRS GVRAIVIRAG DFFGSGKGTW FDQAIVKGIQ
KGKFTYPGHK GVATAWAYLP DLARTFAEVA ARRDTLKAFE VFHFAGHRIT GQQWLDAIQP
IAQAQGWVKP NAALQYSQFP WPIIRIGALF VPTWASLLEM RYLWDKAHAL DNRKLVALLG
AEPHTALAQA VTMTLKDLGF TKDAVAAQAT LVSAR
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