| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3361 |
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| Symbol | |
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| ID | 3964224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3732227 |
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| End bp | 3733465 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637918181 |
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| Product | type II secretion system protein |
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| Protein accession | YP_524601 |
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| Protein GI | 89902130 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACCT ATGCATGGCG TGGCCGCAAC GTCCGGGGCG AGGCCGTTCA GGGCCAGTTA
GAGGCCATGA CCGAAGGCGG CGTGGCCGAC CAGTTGATGT CGATCGGTGT GGCACCGGTC
CACATTGCGA TTGCGCCCGA AAAGACCGAA ACCGCCACCG ACAACTGGTT CGCGCGCCTG
AACCGCAAGC CGGTGGTGGT CGAAGACATC CTGGTGTTCT CGCGCCAGAT GTACACCCTG
AACAAGGCCG GGGTTCCCAT TTTGCGGGCC TTTGCCGGAC TGGAGGCCTC AGCCACCAAG
CCGGCCATGG TCGACATGCT CAAAGACATT CGCGCCAGCC TGGATCAGGG GCGCGAACTC
TCCGCCGCCA TGGCGCGCCA CCAGGACGTG TTTGGTGCTT TCTATATCTC GATGATCCGG
GTCGGCGAGA TGACGGGCCG CCTCACCGAG GTTTTTTTGC GCCTGAACGA ACACCTGGAG
TTCGAGCGCG ACGTGCGCGA GCGCATCAAG CAGGCCATGC GCTACCCCAT TTTTGTGCTG
ATCGCCATGG CGATTGCGGT GGTCATCCTG AACATCTTCG TCATTCCGGT GTTTGCCAAC
GTGTTTGCCG GCTTTCATGC CGAGCTGCCG CTGATCACCC GCGGGCTGCT GGCGTTCTCG
GCCTGGATGC TGGCGTGGTG GCCCTTGCTG CTGGCGGGCG CCATTGGCGC GGTCGTGCTG
ATACGCGGCT ACTTGAACAC GACGGCCGGG CGTTACCGCT GGGACGCGCG CAAGCTCAAA
TTGCCCATCG TGGGCGACAT TGTTTTGAAA GCCACGCTGG CGCGCTTTGC CCGCAGCTTT
GCGCTCTCAA GCCAAAGCGG CGTGCCGCTG GTGCAGGCGC TCACCGTGGT GGCGCAAACC
GTGGACAACG CTTTTATTGG TAGCCGCATC GAGCAAATGC GCGACGGCAT CGAGCGCGGC
GAGACCATCA CACGCTGCGC CGCCGCCACC GGCGTCTTTA CCCCCGTCGT GCTGCAAATG
ATCGCGGTCG GCGAGGAAAC CGGCGAGCTC GACAACCTGC TGTTTGAGAT TGCCGGCATG
TACGAGCGCG AGACGGACTA CAACATCAAG GGCCTGTCGG CGGCGATCGA GCCCATCCTG
CTGGCCGTCA TTGCCGTGCT GGTGCTGCTG CTGGCGCTGG GCGTTTTCTT GCCGCTGTGG
AACCTGGGCC AGGCCGCCAT GGGCAAAGGC GGCGGCTAG
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| Protein sequence | MATYAWRGRN VRGEAVQGQL EAMTEGGVAD QLMSIGVAPV HIAIAPEKTE TATDNWFARL
NRKPVVVEDI LVFSRQMYTL NKAGVPILRA FAGLEASATK PAMVDMLKDI RASLDQGREL
SAAMARHQDV FGAFYISMIR VGEMTGRLTE VFLRLNEHLE FERDVRERIK QAMRYPIFVL
IAMAIAVVIL NIFVIPVFAN VFAGFHAELP LITRGLLAFS AWMLAWWPLL LAGAIGAVVL
IRGYLNTTAG RYRWDARKLK LPIVGDIVLK ATLARFARSF ALSSQSGVPL VQALTVVAQT
VDNAFIGSRI EQMRDGIERG ETITRCAAAT GVFTPVVLQM IAVGEETGEL DNLLFEIAGM
YERETDYNIK GLSAAIEPIL LAVIAVLVLL LALGVFLPLW NLGQAAMGKG GG
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