Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3282 |
Symbol | |
ID | 3962429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 3643984 |
End bp | 3644592 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637918102 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_524522 |
Protein GI | 89902051 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGAAC CCCTCTCCAC CCGCACCGCG CAGCACACCG CTGCGTCGCA AGAACCCGCG CTGGCCGAGG ACGATCTGGG GCTGGTATTC GATCTGGCAC CGGTGGGTCT GTGCATCTCG CGCGAACGCA CGATCCAGCG CTGCAACGCG GCCTTCGGTG CGATGTTCGG CTACGCCCCG GCGGAGCTGC AAGGTCGCTC GCTCGAATGC CTCTACCCCT CGCGCAGCGA GTTCGAGCAC ATCGGCGCGC AGGGTTTTCC GGTGATGCAA AGGACCAGCC ACTACAGTGA CGAGCGCATC ATGTGTCACC GCAGTGGCCG CCTGTTCTGG TGCCATGTGG CGGGCCGTTC GCTGCAGCGT GACCAGCCCT TCGCCTGTGC CGTCTGGATG TTCGAGGACA TCTCGTCGCG TCGACCGGTG GCCATGACCC TGACCGCCCG TGAACGCGAG ATCGTACGTC AGCTCGCGGC CGGCCAGGGT ACCAAGCAAA TTGCCCGCAC CCTGGGGGTG AGTCCGCGCA CCATCGATGG GCACCGCGCG CGCATCATGA GAAAAGTCGG CGCGCAGAGT TCAAGCGAAA TGATTGCCAA GCTGATCGGC TTGAGTTGA
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Protein sequence | MTEPLSTRTA QHTAASQEPA LAEDDLGLVF DLAPVGLCIS RERTIQRCNA AFGAMFGYAP AELQGRSLEC LYPSRSEFEH IGAQGFPVMQ RTSHYSDERI MCHRSGRLFW CHVAGRSLQR DQPFACAVWM FEDISSRRPV AMTLTARERE IVRQLAAGQG TKQIARTLGV SPRTIDGHRA RIMRKVGAQS SSEMIAKLIG LS
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