Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3240 |
Symbol | |
ID | 3960586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3590119 |
End bp | 3591417 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637918059 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_524480 |
Protein GI | 89902009 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.222683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTCCA CGCGTTTTCT GACCGGTATC ACCACCTCTG GCACCCCCCA CCTCGGCAAC TATGTCGGCT CCATCCGGCC TTCGGTGCGG GCCAGCCTGA GGGCCGATGT CGAGAGTTTT TATTTTCTGG CCGACTACCA CGCCCTGATC AAGATTGATG AACCGGCACG CATCCAGCGT TCCACGCTGG AAATAGCCGC CAGTTGGCTC GCCGCCGGGC TGGACCCCGA GCGCGTCGTC TTCTATCGCC AGTCCGATGT CCCGGAAATT CCGGAACTCA CCTGGCTGCT GACCTGTGTC ATTGGCAAGG GCGTGCTGAA CCGGGCGCAC GCCTACAAGG CGGCGGTCGA CAAAAATACC GCCGCAGGTA TTGACCCCGA GTCCGATGTC AGCGCCGGGC TGTTCATGTA CCCGGTGCTG ATGGGTGCCG ACATTCTGAT GTTCAACGCA CACAAGGTGC CGGTCGGGCG CGACCAGGTG CAGCACATCG AGATGGCGCG CGACATGGCG CACAGCTTCA ACCACCGCTA TGGCGATCAC TTTGTGCCGC CCGAGGCCGA AATTGAAGAC AACGTCGCCA CCCTGCCCGG TCTGGACGGG CGCAAGATGA GCAAGAGCTA CGACAACACC ATCCCCCTGT TTGCGCCGCG CGCACAACTC AAAAAGCTCA TTGCGAGCAT CGTCACCGAT TCGCGCGCAC CAGGTGAGCC CAAAGACACT GAAGGCTCTG CCCTGTTCCA GATTTACCAG GCCTTTGCCA CGCCAGAGGA AAGCAGCACG CTGCGCCAGG CTTATGCCGA TGGCATCGCG TGGAGCGACG CCAAACAAAT TGTTTTTGAG CGCATCGACG ACGAAATTGC ACCGCTGCGC GAGGTCTATC AGGCGCTGTT GGACGACCCG GCTCGAATCG AGTCCATCCT GCGCGCGGGC GCAGCCAAGG CCCGTCATAT TGCCACCCCC TTCATGGGTC GTTTGCGTCA GGCCGTGGGC TTGCGTGACC TGCGCACGCA AAGCAGCAAA GCCGCCAAGT CCGTCAAATC CGCCTTGCCG GTCTTCAAAC AATACCGCGA AAACGACGGT CAGTTTTACT TCAAACTGTT GGATACGGAC GGCCGTTTGC TGCTGCAAAG TACGGGCTTT GCTTCACCCA AAGTAGCAGG CCAAACCATT GCCACGCTGC AGACCCAAGG TGCGAGCGCC CTGAATGAAC TGAAAGACCA GTTGCAATGG GGCCTGGACG TGCAAACCCA GGACATTGAT ACTGCCCTGC AAGCGTTGCT GGATGCCAAA ACCAAGTGA
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Protein sequence | MSSTRFLTGI TTSGTPHLGN YVGSIRPSVR ASLRADVESF YFLADYHALI KIDEPARIQR STLEIAASWL AAGLDPERVV FYRQSDVPEI PELTWLLTCV IGKGVLNRAH AYKAAVDKNT AAGIDPESDV SAGLFMYPVL MGADILMFNA HKVPVGRDQV QHIEMARDMA HSFNHRYGDH FVPPEAEIED NVATLPGLDG RKMSKSYDNT IPLFAPRAQL KKLIASIVTD SRAPGEPKDT EGSALFQIYQ AFATPEESST LRQAYADGIA WSDAKQIVFE RIDDEIAPLR EVYQALLDDP ARIESILRAG AAKARHIATP FMGRLRQAVG LRDLRTQSSK AAKSVKSALP VFKQYRENDG QFYFKLLDTD GRLLLQSTGF ASPKVAGQTI ATLQTQGASA LNELKDQLQW GLDVQTQDID TALQALLDAK TK
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