| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3235 |
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| Symbol | |
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| ID | 3962875 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3584118 |
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| End bp | 3586637 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637918054 |
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| Product | AAA ATPase |
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| Protein accession | YP_524475 |
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| Protein GI | 89902004 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[R] General function prediction only |
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| COG ID | [COG0464] ATPases of the AAA+ class
[COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | [TIGR02880] probable Rubsico expression protein CbbX
[TIGR02881] stage V sporulation protein K |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.333619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCCA AGCGATACGA GGCCCTCACC GTTCAGGAAC TACGCAAGCT CGCGCAAGGC
GACATTTTTC GCCCGGCTGA TATCGTTGCA CAGCTCTACC TCGGACGGCG CTATGCCAAG
GGGACGGGCG TTGACAAGGA CGAGAAAGAA GCTGCCCATT GGTTTCGCCT GGCTGCTGAC
AAAGGCAATG CAGAGGCTCA GCGCAATCTT GCGTTTGCCA TCTTTCACGG CAGAGGGGTT
CCCAGGGACG ACGCCGAAGG CATCCGCAGA TTGCGTCTTG CCGCCGACGG GGCGGACGCG
CCCGCGCAGC GCCAGTTGGG TTACCACTTT GCGATCGGCC ATGGTGTCCC TGCGGACGAG
AAGGAGGCGG TGCGCTGGTT CCGCTTAGCC GCCGATCAAA ACGACGTCTT CGCGCAGTAC
AACCTGGCCT TTGCGCTGGC CAGCGGCCGA GGCGTGCCCA CAGACCAGTC GCAGGCCGTC
CACTGGTACC AATTGGCCGC AGAGCAGGGC ATGCCCGAGG CCCAGTGTGC ATTGGGACTG
GCCTATGAGC ACGGGCTCGG CGTTCCGGTG GACTATGAAA AAAGTGTCTA CTGGAACCGG
CTTGCGGCAG AACAAGCGCA TGCCGAATCC TGCAGCAACC TGGGCTGGCT CTACGAGAAC
GGTCTGGGCG TGGCCCAGGA CCTGGAGCAG GCGCGGCATT GGTACGAAGT AGCCGCGCGG
CAGGAATTTG AAACGGCGAA ACAGCGTTTG TTGAAATTGC GGGAACGAAG CGCAAACCTG
CACACCGTTT TCAAACACTC TCTGCGCAAT GATCAGTCCA TCACCGAGTA CCTCGAAACG
GCATTCGCCG GCTTCGTCGG GCTTGACGTG GTCCGGGAGG AGGTCTTTCG TCAGGCCAGC
TACATCCAGG TACAAAAGCT GCGCGCACAG CAGGGCCTGC GCGTGCCAAC CGCGCCTTCG
CGCCATCTGG TATTTATTGG CAATCCGGGC ACCGGCAAGA CAACCATTGC CAGGATCATC
GCCGGCCTCT ACCAGCGGCT GGGCATCCTG AAAACTGACA AGGTCGTCGA GACTGACCGT
GCCGGACTGG TGGCCCCCTA TATTGGCCAG ACGGCGCTCA AGACGCGGGC CATCGTGGAG
TCCGCGCTGG GCGGCGTTTT GTTTATTGAC GAGGCCTACG CCCTGGCCAG ATCCGGTGCA
CAGGACTTCG GCAGGGAAGC CGTCGAAACC CTGCTCAAGA TGATGGAAGA CCATCGCGAT
GAACTGGTGG TGATCGTTGC CGGCTATGTT GCCGACATGG ACGACTTCAT CAATTCCAAT
CCGGGGCTGG CCTCGCGCTT CAACCGCTAC ATCCGATTTC CAGACTACAC CCCCGCTGAG
TTGCTGGAGA TCTTCCTGAA GTTTTGCAGC GCGCACTCTT ATGAGCTGAG CGATTCGATT
CATGCAGGTC TGCAGACGAT CTTCAGCCGT GAAATTCATG TGCAGCGACA GCGCTTCAGC
AATGCACGCT ACGTGCGCAA CCTGTTCGAG AGGGTGATCG AAGCGCAGGC GCAGCGTGTG
TTTGCGCTGG AAAACGCGTC GAAGTCCGAC TTGCAGACGA TCCTGCCCGC GGACGTGGAA
AAGGGGCTGG GGGAAGCTCT CCCGGCGGAC CAGGGGCAGG GGCTGTCGGC CAATTACGAG
GCTGCCCTGA AGCGGCTGAA CGACCTGGCC GGGCTGGGCC GGGTCAAAAA GCAGGTGCAG
CGTTTGTCCG ACTTTGTGCG CATACAACAC GCGCGCGCCG AAGCGGGCAG CAGGGTGGCG
GCCGGGTTTT CACAGCATCT GGTGTTTACC GGCAATCCGG GAACGGGCAA AACGGTGGTC
TCGCGCATCA TTGCGGATAT TTACTTCAGC CTCGGCATCA CCTTGTCCAA CCACATTGTC
GAGGTGGATC GCGCCGGGCT GGTTGCGGGG TATGTCGGCC AGTCAGCGAT CAAAACCCGG
GAGGTGCTGG AGTCTGCCCT GGGTGGCATC CTGTTCATCG ACGAAGCCTA TGCGCTGGCG
CAAGGCGACA ACAACAACGA TTTCGGCCGG GAAGTCATCG ACACCCTGCT TAAAACCATG
GAGGACTACC GGGATCAACT GGTGGTCATC GTGGCCGGTT ACCCGGAACC CATGCGCAAC
TTCATCAACA GCAACCCGGG CCTGCGTTCG CGTTTTAACC ATTACATTGA GTTTGACGAC
TACGGGCCTG ACGATCTTCT TGCCATATTC GAGTCCTTCT GCCGCGAATC GGAATACGTG
CTGGACGCTG CCGCCCGCGC TTTTCTACAA GAGAACCTGA CGACACTGTT CAATGGCGGC
CAGACGACCG ACAACGGCCG CTTTGCGCGC AACGTCTTTC AGCGCTGCGT GGAGGTGCAG
GCCAACCGGA TTTTGCACAC CGGGGAGCAT GCGAGCAAGG ACCTGAACAC GCTGACAACA
TCCGATGTAT CGGAAGCACT CAAAGAAGTC CTGACGGATA TCCCTCAAAG CTCCGCCTGA
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| Protein sequence | MPSKRYEALT VQELRKLAQG DIFRPADIVA QLYLGRRYAK GTGVDKDEKE AAHWFRLAAD
KGNAEAQRNL AFAIFHGRGV PRDDAEGIRR LRLAADGADA PAQRQLGYHF AIGHGVPADE
KEAVRWFRLA ADQNDVFAQY NLAFALASGR GVPTDQSQAV HWYQLAAEQG MPEAQCALGL
AYEHGLGVPV DYEKSVYWNR LAAEQAHAES CSNLGWLYEN GLGVAQDLEQ ARHWYEVAAR
QEFETAKQRL LKLRERSANL HTVFKHSLRN DQSITEYLET AFAGFVGLDV VREEVFRQAS
YIQVQKLRAQ QGLRVPTAPS RHLVFIGNPG TGKTTIARII AGLYQRLGIL KTDKVVETDR
AGLVAPYIGQ TALKTRAIVE SALGGVLFID EAYALARSGA QDFGREAVET LLKMMEDHRD
ELVVIVAGYV ADMDDFINSN PGLASRFNRY IRFPDYTPAE LLEIFLKFCS AHSYELSDSI
HAGLQTIFSR EIHVQRQRFS NARYVRNLFE RVIEAQAQRV FALENASKSD LQTILPADVE
KGLGEALPAD QGQGLSANYE AALKRLNDLA GLGRVKKQVQ RLSDFVRIQH ARAEAGSRVA
AGFSQHLVFT GNPGTGKTVV SRIIADIYFS LGITLSNHIV EVDRAGLVAG YVGQSAIKTR
EVLESALGGI LFIDEAYALA QGDNNNDFGR EVIDTLLKTM EDYRDQLVVI VAGYPEPMRN
FINSNPGLRS RFNHYIEFDD YGPDDLLAIF ESFCRESEYV LDAAARAFLQ ENLTTLFNGG
QTTDNGRFAR NVFQRCVEVQ ANRILHTGEH ASKDLNTLTT SDVSEALKEV LTDIPQSSA
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