Gene Rfer_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_3212 
Symbol 
ID3961188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp3559122 
End bp3560636 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content62% 
IMG OID637918031 
Producthypothetical protein 
Protein accessionYP_524452 
Protein GI89901981 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGAGC TGATCAACCA CCTCTCGCTC GGTTTCGGTG TCGCCTTCAC ACCGATCAAC 
CTCACGTATG CCTTTGTCGG CTGTCTGCTG GGCACCTTGA TTGGTGTGCT GCCGGGCATT
GGGCCGCTGG CCACCATCGC CATGCTGTTG CCCGCCACCT ACGGGCTACC CCCGGTGTCG
GCGCTGATCA TGCTGGCCGG TATTTACTAC GGGGCCCAGT ATGGCGGCTC CACCACGGCC
ATTCTGGTCA ACCTGCCGGG TGAGGCGTCG TCGGTGGTCA CGGTGATTGA CGGCTACCAG
ATGGCGCGCC AGGGCCGCGC CGGCCCGGCA TTGGCGGCGG CTGGACTGGG CTCGTTTTTT
GCCGGCTGTG TCGGCACGCT GGTGCTCGCC GCCTTTGCCG TCCCCTTGAC CGAGCTCGCC
TTCATGTTTG GCGCGGCCGA ATATTTTTCA TTGATGGTGC TGGGGCTGAT TGGCGCCGTG
GTGCTGGCCT CGGGCTCGCT GCTCAAGGCG TTTGGCATGA TTTTGCTGGG TTTGCTGCTG
GGCATGGTCG GCACCGATGT CAACTCGGGG GTGGCGCGTT TCAGTTTTGA CATTCCGGAG
CTGACCGACG GCATCGGTTT TATCGTGATT GCCATGGGCC TGTTTGGCTA TGGCGAGATC
ATCAGCAACC TGGGCAAACA TGAGAGCGAA CGTGAAGTAT TCATCGCCCG TGTACAGGGC
TTGCTGCCAA GCCGGCAGGA CTTCAAGCGC ATGGTGCCGG CGGTCCTGCG TGGCACGGCC
CTGGGCTCGG TGTTGGGTAT TTTGCCGGGC GGTGGCGCGG TGATGGCGGC GTTCGCGGCC
TACACGCTCG AGAAGAAAAC CAGCCTGCAG CCGGGTGAAG TGCCATTTGG CCAAGGCAAT
ATCCGGGGCG TGGCCGCGCC GGAGTCGGCC AACAACGCGG CCTCGCAAAC CTCCTTCATT
CCCTTGCTGA CCTTGGGCAT TCCACCCAAC GCGGTGATGG CGCTGATGGT GGGCGCCATG
ACCATCCACA ACATCCAGCC CGGCCCGCAG GTGATGACCA GCAACCCGGA GCTGTTTTGG
GGCCTGATTG CGTCCATGTG GATTGGCAAT GCCATGTTGA TTGTGTTGAA CCTGCCGCTG
ATTGGCATCT GGATCAAGCT GCTGAGCGTG CCGTACCGCT GGCTGTTTCC GGCCATCGTG
CTGTTTTGCG CGATTGGGGT TTATTCCACC AACAACAGCA CCTGGGACGT GTGGATGGTG
GGCTTGTTTG GGGTCATTGG CTATGTGTTC ATCAAGCTCG GCATGGAGCC GGCACCGCTG
CTGCTGGGTT TTATTCTGGG GCCGATGATG GAAGAAAACC TGCGCCGTGC GCTGCTGCTG
TCGCGCGGTG ACTGGAGCGT CTTGCTGACG CGTCCCCTGT CGGCGAGCCT GTTGGCGCTG
GCGGCGCTGT TGCTGCTGAC GGTGCTGCTG CCGTCGATCA AAAAGAAGCG CGAAGAAGCG
TTTGTCGAGG CCTGA
 
Protein sequence
MMELINHLSL GFGVAFTPIN LTYAFVGCLL GTLIGVLPGI GPLATIAMLL PATYGLPPVS 
ALIMLAGIYY GAQYGGSTTA ILVNLPGEAS SVVTVIDGYQ MARQGRAGPA LAAAGLGSFF
AGCVGTLVLA AFAVPLTELA FMFGAAEYFS LMVLGLIGAV VLASGSLLKA FGMILLGLLL
GMVGTDVNSG VARFSFDIPE LTDGIGFIVI AMGLFGYGEI ISNLGKHESE REVFIARVQG
LLPSRQDFKR MVPAVLRGTA LGSVLGILPG GGAVMAAFAA YTLEKKTSLQ PGEVPFGQGN
IRGVAAPESA NNAASQTSFI PLLTLGIPPN AVMALMVGAM TIHNIQPGPQ VMTSNPELFW
GLIASMWIGN AMLIVLNLPL IGIWIKLLSV PYRWLFPAIV LFCAIGVYST NNSTWDVWMV
GLFGVIGYVF IKLGMEPAPL LLGFILGPMM EENLRRALLL SRGDWSVLLT RPLSASLLAL
AALLLLTVLL PSIKKKREEA FVEA