| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3141 |
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| Symbol | |
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| ID | 3962537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 3480635 |
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| End bp | 3481381 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637917960 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_524381 |
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| Protein GI | 89901910 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.167044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATCCTCAT TACCGGCGGC TCCCGAGGCA TCGGGGCTGC CATTGCCCAC
CTTGCCGCCG AGGCGGGCTA CGCGGTCTGC ATCAGCTACC TCCACCATCG GGCTGCGGCC
GAGGCGGTTG TGGCGGCCAT CACGCAAAAA AATGGCATCG CCATGGCCGT TCAGGCCGAC
GTGGCGATCG AGGAAGATGT GATCCGGCTT TTCAAGCACG TCGATGCCTC TTTCGGCCCG
CTGACCGCAC TGGTCAACAA CGCCGGGATT CTGGAGCGGC AAGCGCGCGT TGACGAGATG
GACAGCACAC GCATCCAGCG CATCTTTGCC ACCAACGTGG TCGGCAGCTT CATCTGTTCA
CGCGAAGCGG TGCGGCGCAT GTCGACCCGG CACGCCGGCA AGGGCGGCGC CATCGTCAAC
ATGTCATCAC GCGCATCGCA CCTTGGTGCC CCTGGCGAAT ATGTCGACTA CGCCGCATCC
AAGGCGGCCA TTGACACCCT GACCATTGGC TTGGCCAAAG AGGTTGCGGC GGAGGGCATC
CGTGTCAACG CCGTGTCCCC CGGAATCATC TACACCGACA TTCACGCCAG TGGCGGCGAC
CCCCAGCGGG TGGATCGGGT GAAAGCGAGC GTGCCGATGA AGCGCGGCGG TTATCCCGAA
GAGGTTGCCA AGGCCGTTCT GTGGCTGCTG TCTGATGATG CCTCGTATAC CACCGGCGCC
TCTATCGATG TGGCCGGTGG GCGGTAG
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| Protein sequence | MKKIILITGG SRGIGAAIAH LAAEAGYAVC ISYLHHRAAA EAVVAAITQK NGIAMAVQAD
VAIEEDVIRL FKHVDASFGP LTALVNNAGI LERQARVDEM DSTRIQRIFA TNVVGSFICS
REAVRRMSTR HAGKGGAIVN MSSRASHLGA PGEYVDYAAS KAAIDTLTIG LAKEVAAEGI
RVNAVSPGII YTDIHASGGD PQRVDRVKAS VPMKRGGYPE EVAKAVLWLL SDDASYTTGA
SIDVAGGR
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