Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_3136 |
Symbol | |
ID | 3962532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 3475546 |
End bp | 3476322 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637917955 |
Product | short chain dehydrogenase |
Protein accession | YP_524376 |
Protein GI | 89901905 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.473581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTGC ATTTGAAAGA CAAGGTGGTC ATCGTCACTG GAGGTGCCAG CGGCATTGGT GCGGCCATCT CGCTGACGCT GGCGCAAGAG GGGGCGATTC CCGTCATCCT GGGCAAAAGC CCGATGCCGG CGGAGTTCGC CCAGCAATTG CTGGCGCTTG CCGCCAGGCA ACTCTTCATT CAGGTCGAGC TGTCGGATGA TGCGGCCTGC CGTGCTGCGG TTGAGCAGGT GGTGCGCGAC CTGGGCCGCG TGGACGGCCT GGTGAACAAC GCCGGCATCA ACGACAACGT TGGCCTGGAC GCCGGGCGTG ATGCCTTTGT GGGCTCACTG GAGCGCAACC TGATTCACTA CTACGTGATG GCGCACTACT GCGTGCCGCA CCTCAAAGCC AGCAAGGGCG CCATCGTCAA CGTGTCGTCC AAGACCGCTG TCACCGGCCA GGGCAACACC AGCGGCTATT GCGCCTCCAA GGGGGCGCAG CTGTCGCTGA CCCGTGAGTG GGCGGCGGCG CTGCTGGGTG ATGGCGTGCG GGTGAATGCG GTGATACCGG CGGAGGTGAT GACGCCTCTG TACGCGCGCT GGATCAACAG CTTTGACGAC GCGCAAGAAA AACTGTCCAG CATCACCCAA AAAATCCCCT TGGGCCACCG CATGACCACC TCGGAAGAAA TCGCGCGCAT GTGCGTTTTC CTGTTGTCTG ATGCCTCGTC CCACACCACC GGGCAATGGA TTTTTGTGGA TGGTGGCTAC ACCCACTTGG ACCGGGCCCT GTCCTAA
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Protein sequence | MDLHLKDKVV IVTGGASGIG AAISLTLAQE GAIPVILGKS PMPAEFAQQL LALAARQLFI QVELSDDAAC RAAVEQVVRD LGRVDGLVNN AGINDNVGLD AGRDAFVGSL ERNLIHYYVM AHYCVPHLKA SKGAIVNVSS KTAVTGQGNT SGYCASKGAQ LSLTREWAAA LLGDGVRVNA VIPAEVMTPL YARWINSFDD AQEKLSSITQ KIPLGHRMTT SEEIARMCVF LLSDASSHTT GQWIFVDGGY THLDRALS
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