| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3117 |
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| Symbol | |
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| ID | 3962130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3455325 |
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| End bp | 3456407 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917936 |
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| Product | porin |
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| Protein accession | YP_524357 |
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| Protein GI | 89901886 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.482889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAA CTTTGATCGC CTTGGCCGTT CTCGCCGCAT CCGGCGCCGC CATGGCCCAA
TCAACAGTCA CTTTGTATGG CATTGCCGAT GTCGTTGGCA GGTACAGCAC CACCGACCTA
GGCAAAGGTG CCGGTTCGCT CGCCAAATCC GAGATCGTAA GCGGTGGTAT CAATACATCG
CGCTGGGGTC TGAAGGGCTC TGAAGAGCTG GGCGGCGGCT TGAAAGCCAA CTTCAAGTTG
GAAGAAGGCT TTGCCATGGA TACCGGTGCA GGTCAGACCA AAGACTTCGC GAGCGCTCCC
CAGGCCTTTT CTCGTGAGTC CTGGGTGGGA TTCTCCGGTG GCTTTGGTGA AGTCAAACTG
GGCAAGACCT GGACGCCGTT TGACGACGTG ATTGGCACGT CTGACGGCAT GTTTAATGCG
GTAGGAATGT CTCCCATGCG CCTCGCATTC GCATCAGAAA ACTACCGCGA CACGATCAGC
AACACCATTT ATTACGCAAC CCCCAACTTC AGTGGTTTTG CGGCTGCAGC AAGCTACAGC
GCGAGGGAAG GTGACCCCAA ACGCGCACGG GTTGAAGCGT TCAACGTGAC CTATGGATCG
GGTCCGGTGG CCGTGCAATT CGCGTACCAG CAAGAGCACC TGGAGCTGGC AACAGCCGGT
GGCATAGCAG GTACCACAGC AAACAATGGT ACCTATGCGG TTCTGGGTGG CTCTTATGAC
TTTGGCATCG CCAAGGCCAA GGCCAACTAT GCCAAGGTCA CCAATAAGGC TTGGGGCGGC
GGCTCAGGCG AAAATATTGA CGGCAACAAC ACCAAAGAGT GGCAAATCGG CGTAGACGTT
CCGATGGGCA CCGCGCTGAC CCTGTCGGCA AGCTATGCCA AGTCTGATGA CAATAACGCC
ACAGGGGCTA ATCGCACGCA AAAGCGCGAT GGTTTTGGCG TGGCTGGCAA GTATGTGCTT
TCCAAACGCA CCTTCCTTTA CGGCGGCTTC AGCCTCAATA CAGCGTCACA AGTGGTGACT
GGCTCGACGA CCGGCGACTG GAAGAAAAAT ATTGTCGAAT TGGGCATGAA CCACAAGTTC
TGA
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| Protein sequence | MKKTLIALAV LAASGAAMAQ STVTLYGIAD VVGRYSTTDL GKGAGSLAKS EIVSGGINTS
RWGLKGSEEL GGGLKANFKL EEGFAMDTGA GQTKDFASAP QAFSRESWVG FSGGFGEVKL
GKTWTPFDDV IGTSDGMFNA VGMSPMRLAF ASENYRDTIS NTIYYATPNF SGFAAAASYS
AREGDPKRAR VEAFNVTYGS GPVAVQFAYQ QEHLELATAG GIAGTTANNG TYAVLGGSYD
FGIAKAKANY AKVTNKAWGG GSGENIDGNN TKEWQIGVDV PMGTALTLSA SYAKSDDNNA
TGANRTQKRD GFGVAGKYVL SKRTFLYGGF SLNTASQVVT GSTTGDWKKN IVELGMNHKF
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