| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_3008 |
|---|
| Symbol | |
|---|
| ID | 3960353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | - |
|---|
| Start bp | 3315448 |
|---|
| End bp | 3315768 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637917828 |
|---|
| Product | transport-associated |
|---|
| Protein accession | YP_524250 |
|---|
| Protein GI | 89901779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.845377 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTTTAT CTAAAGTTAA TCGGGCTTCA TGGTCGACCG TGAAGCCCGA TCAACACAGA
TTTCTACCGC TGGAGAACAT GATGAGAACC GATGCCGAAC TGAAAGCCGA CGTGATGGAG
CGGCTGGACG CGATTCCCGC TGTCAACGCG TCTGATATTG AAATCGACGT TGACAGAGGC
GTGGTGACCT TGAGTGGGCA CGTCGACACG CACCAGACCA GATTTCAGGT GGAGCGAACG
GCCCGGCGTG TTCCCGGCAT ACGCAGTTTG TCCATCAGCC TCAAACCAGG CCAATTGGCT
GGCAAGAAAC ATTACCACTG A
|
|---|
| Protein sequence | MALSKVNRAS WSTVKPDQHR FLPLENMMRT DAELKADVME RLDAIPAVNA SDIEIDVDRG
VVTLSGHVDT HQTRFQVERT ARRVPGIRSL SISLKPGQLA GKKHYH
|
|---|
| |