| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2963 |
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| Symbol | |
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| ID | 3962244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 3270266 |
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| End bp | 3270694 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917782 |
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| Product | large conductance mechanosensitive channel protein |
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| Protein accession | YP_524205 |
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| Protein GI | 89901734 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1970] Large-conductance mechanosensitive channel |
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| TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.232112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAATGA TGCAAGAGTT CAAGGAGTTT GCCGTCAAAG GCAATGTGAT GGATCTCGCC
GTCGGCGTGA TTATTGGTGG CGCTTTCGGC AAGATTGTCG AATCCGTGGT GGGCGATCTG
GTGATGCCGG TGGTCGGTGC GATCATCGGA AAACTGGATT TTTCCAATCT TTTCGTGGCA
CTTCGGCAGG CGCCGGAAGG CACCGCGATG ACCCTGGACG CGCTGAAAAA GGCCGGCGTT
CCGGTCCTGG CCTACGGCAA CTTCATCACG GTGGCGGTTA ACTTTGCCAT TTTGGCGTTC
ATCATCTTCC TGATGGTCAA GCAGATCAAC CGGCTTAAGA GAAGTGCACC GCCGCCGCCC
GCTCCCGCCC CAGCGCCAGC CGAAGATGTT TTGTTGTTGC GTGAAATCCG GGACAGCCTG
AGAAAATAG
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| Protein sequence | MAMMQEFKEF AVKGNVMDLA VGVIIGGAFG KIVESVVGDL VMPVVGAIIG KLDFSNLFVA
LRQAPEGTAM TLDALKKAGV PVLAYGNFIT VAVNFAILAF IIFLMVKQIN RLKRSAPPPP
APAPAPAEDV LLLREIRDSL RK
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