| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2832 |
|---|
| Symbol | |
|---|
| ID | 3960671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 3132107 |
|---|
| End bp | 3132472 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637917652 |
|---|
| Product | phage transcriptional regulator, AlpA |
|---|
| Protein accession | YP_524075 |
|---|
| Protein GI | 89901604 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3311] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0794496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATTC TCAGATTACG CGCTGTCCTG GCGGAAACCG GCCACCGCAG CCACGCCAGC
ATTTACAGCG CTGTCCACGC GGGTACTTTC ACCATGCCAG TGCAGATCGG TGAACGCTCT
GTGGGTTGGC CGTCCGATGA AGTGCAGGCC ATCAATGCGG CGCGGATTGC AGGCAAGTCG
GATGCCGATA TTCGGGCGCT GGTAGATCAA CTCCACGCGG CACGGTGCGC AAACACTGGC
GAACCATTCA AGCCGACGTG GCTGGAAAAA AGCGCAGAGC AAAAGCAACA GGCCGCACAT
CGGACAAAGC GCACCAAACG TGCCGCCCCA GCCAGGGTTT GCAAGACCGA AGCAAATCAT
GGGTAA
|
|---|
| Protein sequence | MSILRLRAVL AETGHRSHAS IYSAVHAGTF TMPVQIGERS VGWPSDEVQA INAARIAGKS
DADIRALVDQ LHAARCANTG EPFKPTWLEK SAEQKQQAAH RTKRTKRAAP ARVCKTEANH
G
|
|---|
| |