| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2708 |
|---|
| Symbol | |
|---|
| ID | 3962994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodoferax ferrireducens T118 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007908 |
|---|
| Strand | + |
|---|
| Start bp | 2981324 |
|---|
| End bp | 2982190 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637917529 |
|---|
| Product | transposase IS3/IS911 |
|---|
| Protein accession | YP_523954 |
|---|
| Protein GI | 89901483 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.710793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACTCAT ACGAAGATCG CATTCGAGCA GTTAGGCTCT ACACAAAACT CGGGAAATGC
ACAGGTGCGA CCATTCGGCA ATTGGGTTAC CCGACAAAGA ATGCGCTCAA GAGCTGGCAT
CGAGAATACG AGCAAGGTGG CAATTTGCGG GTGGGCCATG TGCGGTCAAG ATCAAAATAC
TCAGCCGAAC AGAAAAGAGT TGCCGTCGAG CATTACCTAA ACCACGATCG CTTTCTTGCT
GGAACTCGAA AAGCACTGGG ATATCCGTGC CGCGATACGC TCGCAGCCTG GGTCCACGAG
CTGCTCCCCG AAACACGGAG AAAAGTTGTC GGCAAGGCGC AGGCCGTGCT GCTCCCAAGA
GAGGCAAAGC AAGCGGCAGT CATCGAGCTG TGCACTCGGC AGGTAAGTGC GCAAACAATT
GCTCAAAAGC TTGGCGTGAC TCGGCCAACG TTGTACAAGT GGAAAAATCA ACTACTCGGT
CGCGAGGTGC CCACATCTAT GAAACGCCAC AATGATCCGC CGCCAGCTCC TGAGCGTGCG
GAGCTGGAGT TGCAAGTCGA ATCGCTTCGA CGAGACATCC GGCAATTGCA ACTTGAGCAC
GACCTATTAA AGAAAGCCAA TGAACTGTTA AAAAAAGACT TGGGCGTCGA CCTACAGCTC
CTGACCAACC GGGAGAAGGC GCTATTGGTT GACGCCCTGA GACAAACCTA TGAGCTGTCT
GTACTCATTG TTGAACTTGA CCTTGCTCGC AGTTCCTACT TTTATCACCA GGCCCGTCTA
CGAGGCCCTG ACAAGTATGC TGATGCGCGT CTTGCCATGA CAGATGTCTT CGAGCTCAAT
CGTAAGCGCG CGGTGAACCC ATCTTGA
|
|---|
| Protein sequence | MYSYEDRIRA VRLYTKLGKC TGATIRQLGY PTKNALKSWH REYEQGGNLR VGHVRSRSKY
SAEQKRVAVE HYLNHDRFLA GTRKALGYPC RDTLAAWVHE LLPETRRKVV GKAQAVLLPR
EAKQAAVIEL CTRQVSAQTI AQKLGVTRPT LYKWKNQLLG REVPTSMKRH NDPPPAPERA
ELELQVESLR RDIRQLQLEH DLLKKANELL KKDLGVDLQL LTNREKALLV DALRQTYELS
VLIVELDLAR SSYFYHQARL RGPDKYADAR LAMTDVFELN RKRAVNPS
|
|---|
| |