Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2682 |
Symbol | |
ID | 3962015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2953153 |
End bp | 2954376 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637917503 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_523929 |
Protein GI | 89901458 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATA AAAAATTGCC TGCACAGTTG CACCGCGACA CGTTGGCGGT GCGTGCAGGC GTTGAGCGAA GCCAATATGG CGAAAACTCC GAAGCCCTGT ACCTGACCAG CAGTTTTGTG CAGCCCGATG CTGAGACCGC CCGCAAGCGT TTCGCCATGG AGGAAGATGG TTACACCTAC ACCCGGGTCA GCAACCCCAC CGTCTCGGGC ATGGAGCAGC GCCTGGCCGC GCTGGAAGGA ACCGAGGCCG CGATTGCCAC CAGCAGTGGC ATGGCGGCCG TGTTGCTGCT GGGCATGGGA CTGTTACGTG CGGGAGACCA TGTGGTGTGT TCGCAGTCGG TTTTTGGCTC TACCCTGCGA TTGTTTGCTA CTGAGTTTGC CAAATTTGGT GTCACGACGA CTTTTGTGTC GCAGACCGAC GTGGCGCAAT GGCAAGCAGC GTTGCAGCCC AATACCCGTT TGCTGTTTGC CGAAACACCG ACCAACCCGT TGACCGACAT TTGCGACATC TCCGCGCTGG CCCGTGTGGC GCACGCGGGC GGTGCGCTAC TGGCGGTGGA CAATTGTTTT TGTACCCCGG CATTGCAAAG ACCGATCGAG TATGGGGCCG ACTTTGTCAT TCATTCCGGC ACCAAGTATC TGGACGGCCA GGGCAGGGTG GTGGCGGGCG CCATTTGTTG CTCGCAAAAA TATGTCAATG ATGTGTTTTG GCCGATTAAT CGAACCGTGG GCATGGTGCT CTCGCCCTTC AATGCGTGGG TGGTGACCAA GGGGATGGAG ACACTGTCGC TACGGATGAA GGCGCAGTGC GACAGCGCGC TGGATTTGGC CAACTGGCTG CAAGACCAGC CGCAAGTTGC GCGGGTCTAT TACCCCGGCC TGGCCTCGCA TCCGCAGCAT GCCTTGGCCA TGCGCCAGCA AAGCGGGCTG GGTGGCGCTG TGGTGTCGTT TGATGTGCGA GCACCAGACG CAACGCAGGC GCGCAGCAAT GCTTTTCATG TGATCGACAG CACCCAGGTG TGCTCGATCA CCACCAACCT GGGCGACACC AAAACCACCA TTGCCCACCC CGCCACCACC TCGCACGGTC GTCTCACCGA AGACCAACGC CAGGCCGCTG GCATCGGTCA GGGCTTGATT CGCATGGCAG TGGGCCTGGA CCACATTGAC GATCTCAAGG CCGACCTGCT GCGCGGCCTG CAGACCTTAA GTGCACTGAA ATGA
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Protein sequence | MTDKKLPAQL HRDTLAVRAG VERSQYGENS EALYLTSSFV QPDAETARKR FAMEEDGYTY TRVSNPTVSG MEQRLAALEG TEAAIATSSG MAAVLLLGMG LLRAGDHVVC SQSVFGSTLR LFATEFAKFG VTTTFVSQTD VAQWQAALQP NTRLLFAETP TNPLTDICDI SALARVAHAG GALLAVDNCF CTPALQRPIE YGADFVIHSG TKYLDGQGRV VAGAICCSQK YVNDVFWPIN RTVGMVLSPF NAWVVTKGME TLSLRMKAQC DSALDLANWL QDQPQVARVY YPGLASHPQH ALAMRQQSGL GGAVVSFDVR APDATQARSN AFHVIDSTQV CSITTNLGDT KTTIAHPATT SHGRLTEDQR QAAGIGQGLI RMAVGLDHID DLKADLLRGL QTLSALK
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