Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2676 |
Symbol | |
ID | 3962006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2943385 |
End bp | 2945934 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637917494 |
Product | polysaccharide export protein |
Protein accession | YP_523923 |
Protein GI | 89901452 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAC ATGAATTAGC TATTAGCTCG CACAAGAACG CCTTTAATTC ACCCAAAACC GCGATCTGCG TCTTGATCGT TGCTAGTTTG TTCTCTGGCC TGAGCTCGGC GCAGGTTCTG GCGCCTCCTG GTGGGACTTC GGGTAGCGCA ACTGGCTTCT CATCGGGCCC GTCGGTCGGT GCACCCGCCG CCGCAGGCTA TCCGTCCTCG GCCCCATCAA CCACACTCTC CCCTGCCGCC ATGGCCGCTG CCCGCTCTGC GGGTCTCACT GACGCCGCAG GCAACCCGGT TGGCCCAGGC ACCGACAAAG CTGACCTGAA CACCGACAAA ACCAACAGCG AAAGCTTTCG GGCCAAGCTC CCACCGCTGG GAACCAACCA GTTTGCCAAA TTTGTCCAGG ACACTACAGG CCGTACGCTA CCCCTGTATG GTTACAACCT GTTTGACGGC AACGGCTTTC CCGCCCTCAC CAACGTACCC GTTCCTGCCA ACTATGTGCT GGGGCCAGGG GATGACATCA GCATCAAAAT CTGGGGCGCT ATTGACGTCA ACCTTAACCT GCCGATAGAC CGCAACGGCC AAGTCACCAT CCCCAAAGTG GGTCCGCTCA CCGTGGCGGG CACCCGTGCC GACCAGTTGG AGGCTTTGCT CAAGACCCAC GTCGGCCGCG TGTACAACAA CTTTGAGCTC AGCGCCACCT TGGGTCGCCT GCGCTCCATT CAGGTGTTTG TGGTCGGCCA GGCGCGCCAA CCCGGTGTGC ACACGGTGTC AAGCCTGTCC ACACTCATCA GCGTCTTATT CGAGAGCGGC GGCCCCTCCG CCACCGGGTC CATGCGCCAG ATCCAGCTCA CGCGCGCTGG CAAAACAGTC TCCACCATCG ATCTCTACAA GTTCATCCAC AGCGGCGACA CCAGCGCCGA CGCGCGCCTG CTGCCCGGTG ACGTCATCGT CATCCCCCCC GCTGGAGCAC GCGTGGCCCT GTTGGGAGCG CTCGACAGCG CCGCCATCTA CGAGCTCTCG GGCAAAGAAG AGACCCTGGC CAAGCTCTTG TCTTACGGCG GTGGCCAGCA AATTTTGACC ACTCCGCACA AGGTTCTGGT TGAACGCATC AACCAGGCGC AGGACAAAGC CCCCCGCGTC ATTGAAGAAC GCGTCCTCAA CGCCGACGGC CTCAATTCCA CGGTGCGAGA CGGCGACGTT GTCACCCTGT TCAAGATCAG CCCCGAGTTT GCCAACGCCG TCACTTTGCG CGGCAACGTG GCTAAACCTC TGCGCTATGC CTACCGCCCG GGCATGAAAG TGTCTGATCT GATCCCCGAG GTCAGTGCGC TGATTCAGGA CGACTACTAC AGCCGCAAAA ACATTCTGGT GCAGTACCAG TCGCCCAGAC TGTCCCTGAC TGAACGTACG GCTGAAGGGT TTAGCTATGG TCGTGATGGC AACATAATGC AAAACGGGTC GAACAGGCAG TCCCCGGCAG ACCGTACGTC TGAAGGGGGC AACTATGGTC GTGATGGCAA CATGGAGCAA AACGGGTCGA ATAAACAAGT CTCGGCAGAG CAAATCGTCA CCGATGTTAA AAATCAGCTT AACGAAATTA ATTGGGACTA CGCCGCCATT GAGCGGCTCG ATGCCAAGGA ACTGCGCACC ACACTGATTC CCTTCAACCT CGGCAAAGCC GTCAAAGACA GAGACCCTGT CAACGATCTC ACGCTGCAAG CTGGCGATGT GGTCACCATT TTTAGTGTCA ATGACCTGCC GGTGCCGGCC GAAAAACGCA GCCAGTTTGT GCGTGTTGGG GGTGAGGTGA AGGTGCCCGG CATTTACCAG ATTCAGCCCG GCGAGACCCT GCCTGGTCTC ATCCAAAGAG TCGGCGGCTT CAGCCAAAAC GCCTTTGTCT ATGGCACCGT CTTTACCCGT GAGTCCACCC GCGTCCAGCA GCAGGAAAAC ATCAACAAGT CGATGCGACG TATGGAGTCA GACATCAACG CGCAAACAGC CTCTGCATTG CAGAACGCCA GTAGCGCGGA CAAAGCCACT ACCCTGCAAG TGCAGATTGA AAATCAGAAA AATTTGCTAA GGCGCCTGCA GAGCCTCAAG GCCAACGGCC GCATTGCGCT GGAGTTGGAC CCCGATAATC CCGTGCCGCC CGCCATTGCA CTGGAAGACG GTGACCAAAT CATCGTTCCG CACCGGCCCA GCTTTGTCGG CGTATTTGGC GAAGTGTTCG CCGAGAGCTC ATTCATCTAC AAACCCGGCT ACACCGTCAG CCACTACATT GACAAAGCCG GCCTCACCCG CGACGCCGAC ACCGACAATC TGCTGCTGAT CCGCGCCGAC GGCTCGGTCG AAGGCAGTTC GCGCCGTTCA TTGTTCTGGA GCAGCGGCGT GATGGACAAG AAGCTCAACC CCGGCGATTC CATTTTTGTG CCCGGCTTGA TAGACCGCCG TACCGCCTAC ACCCAGTTCA TGGAAGGCGC CAAGGACTGG ACGACCCTCC TGTACCAGTT TGGCTTGGGC GCGGCCGCCC TGAAGACTAT CCGCAACTAG
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Protein sequence | MTLHELAISS HKNAFNSPKT AICVLIVASL FSGLSSAQVL APPGGTSGSA TGFSSGPSVG APAAAGYPSS APSTTLSPAA MAAARSAGLT DAAGNPVGPG TDKADLNTDK TNSESFRAKL PPLGTNQFAK FVQDTTGRTL PLYGYNLFDG NGFPALTNVP VPANYVLGPG DDISIKIWGA IDVNLNLPID RNGQVTIPKV GPLTVAGTRA DQLEALLKTH VGRVYNNFEL SATLGRLRSI QVFVVGQARQ PGVHTVSSLS TLISVLFESG GPSATGSMRQ IQLTRAGKTV STIDLYKFIH SGDTSADARL LPGDVIVIPP AGARVALLGA LDSAAIYELS GKEETLAKLL SYGGGQQILT TPHKVLVERI NQAQDKAPRV IEERVLNADG LNSTVRDGDV VTLFKISPEF ANAVTLRGNV AKPLRYAYRP GMKVSDLIPE VSALIQDDYY SRKNILVQYQ SPRLSLTERT AEGFSYGRDG NIMQNGSNRQ SPADRTSEGG NYGRDGNMEQ NGSNKQVSAE QIVTDVKNQL NEINWDYAAI ERLDAKELRT TLIPFNLGKA VKDRDPVNDL TLQAGDVVTI FSVNDLPVPA EKRSQFVRVG GEVKVPGIYQ IQPGETLPGL IQRVGGFSQN AFVYGTVFTR ESTRVQQQEN INKSMRRMES DINAQTASAL QNASSADKAT TLQVQIENQK NLLRRLQSLK ANGRIALELD PDNPVPPAIA LEDGDQIIVP HRPSFVGVFG EVFAESSFIY KPGYTVSHYI DKAGLTRDAD TDNLLLIRAD GSVEGSSRRS LFWSSGVMDK KLNPGDSIFV PGLIDRRTAY TQFMEGAKDW TTLLYQFGLG AAALKTIRN
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