Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2658 |
Symbol | glyA |
ID | 3960965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2925402 |
End bp | 2926646 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637917476 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_523905 |
Protein GI | 89901434 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0261213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAACC GTAACATCCT CATCGAACAA ACCGACCCCG AAATTTTTGC CGCTATTGCA GCGGAAAACG CCCGCCAGGA ACAGCACATC GAGCTGATCG CCAGCGAAAA CTACGCCTCA CCCGCCGTCA TGGCCGCGCA GGGCACGCAA CTGACTAATA AGTATGCTGA AGGCTACCCC GGCAAACGCT ACTACGGCGG TTGCGAGTTT GTGGACATTG CCGAGCAACT GGCCATTGAC CGCGTCAAGC AAATCTTTGG CGCCGATGCC GCCAACGTGC AACCCCATTG CGGCGCGTCC GCCAACGAGG CGGTGTTTCT GGCCTTTTTG AAACCCGGCG ATACCATCAT GGGCATGAGC CTGGCTGAAG GCGGCCACCT GACGCACGGC ATGGCACTGA ACATGAGTGG CAAGTGGTTC AACGTCGTCA GCTACGGCCT GAACGACAAG GAAGAGATTG ACTACGACGC CATGGAGCGA AAAGCCCATG AGTCCAAACC CAAACTGATC ATCGCCGGTG CCTCCGCCTA CAGCCTGCGC ATCGACTTTG CTCGCTTTGC CAAGGTCGCC AAAGACGTGG GCGCCATCTT TATGGTGGAC ATGGCGCACT ACGCCGGCCT GATTGCCGCC GGCATCTACC CCAACCCCGT GCCACACGCT GACGTGGTGA CCAGCACCAC CCACAAAAGC CTGCGCGGCC CGCGAGGCGG CATCATTTTG ATGAAAGCGC AGCACGAGAA AGCCATCAAC AGCGCCATCT TCCCCGGCCT GCAAGGTGGC CCGCTGATGC ATGTGATTGC GGCCAAGGCG GTGGCGTTCA AAGAAGCGCT ACAGCCCGAG TTCAAGGTCT ATCAGCAACA AGTGTTGACC AACGCCCGCG TCGTGGCTGA AACGCTGGTG TCGCGCGGCC TGCGCATTGT GAGTGGCCGC ACTGAAAGCC ACGTCATGCT GGTCGATCTG CGCTCCAAAA GCATCACTGG CAAAGAAGCT GAAGCGGTAC TGGGCAGCGC CCACATGACC ATCAACAAAA ATGCCATCCC CAATGACCCT GAAAAACCCA TGGTCACCAG CGGCGTGCGC ATCGGTACCC CGGCCATGAC GACCCGCGGC TTCAAGGACG AAGAAGCCCG CATTACTGCA AATTTGATAG CAGATGTACT AGATAATCCG AGGGATAGCG CCAATATTGA TGCAGTACGC GCCAAGGTCA ACGCACTAAC CAAACGCTTC CCTGTTTATG GATAA
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Protein sequence | MYNRNILIEQ TDPEIFAAIA AENARQEQHI ELIASENYAS PAVMAAQGTQ LTNKYAEGYP GKRYYGGCEF VDIAEQLAID RVKQIFGADA ANVQPHCGAS ANEAVFLAFL KPGDTIMGMS LAEGGHLTHG MALNMSGKWF NVVSYGLNDK EEIDYDAMER KAHESKPKLI IAGASAYSLR IDFARFAKVA KDVGAIFMVD MAHYAGLIAA GIYPNPVPHA DVVTSTTHKS LRGPRGGIIL MKAQHEKAIN SAIFPGLQGG PLMHVIAAKA VAFKEALQPE FKVYQQQVLT NARVVAETLV SRGLRIVSGR TESHVMLVDL RSKSITGKEA EAVLGSAHMT INKNAIPNDP EKPMVTSGVR IGTPAMTTRG FKDEEARITA NLIADVLDNP RDSANIDAVR AKVNALTKRF PVYG
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