| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2589 |
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| Symbol | |
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| ID | 3961997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2850254 |
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| End bp | 2851426 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637917407 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_523836 |
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| Protein GI | 89901365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.282343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAGA ACACTTGTAA AAGCATAGGA CTGGCGGCAT TGGTAGCTTG TGGGCTGGGA
CTGTCCACTG CCCAAGCGGA TGAGCTGCTG GTTGGTGTTG AACTGCCCCT GACTGGCACC
CTGGCCCGCG TCGGAGCCGG GATGCATGAA GGCATCATGG TTGCTGCCGA TGTCTTTAAC
AAGACCAACA GCAAGCACAA AATCAAAATT ATCACCGTCG ACAATGAGTC GGCACCGGCC
AAGGCCATTG CGGCAGTTGA GAAACTGGCT AGCCAAGGTG TGGTTGCCAT TGATGGCGGC
TACGGCTCGA ACAATATCGC ACCGGCTTCA GATGCTGCCA GCAAGCTTGG CCTGGTTTAT
GTCACATCAG GCGGCGTCGA TGACAGTCTT GTGAACAGCG GCCGCAAGAA TTTCTTTCGC
ATCAACAATT CCGCCGGGTA TCAGAAGGCC ATGGTTGGGC TGCTGGGCGA TTTGAATGTC
AAGTCTGTAT CCATTTTGTA TTCGACCAAA GAGGCGACTG CTGGTCTTGC CAGCGATCTT
CAAAAAAGTT TGACGGCCAA AGGCGTTACC GTCGTAGCCC ACGCCTTCGA TCCCGCGATG
ACCGATTTCA AGCCGATCAT CAACAAGGTG AAATTGCAGG ATAAATCCGA AGTCATCGCG
ATGATCGGTT ACGAAAATGA CTACGTTGGC ATTCTTCGTG CTGCGCGGGT GCTGAAGCCT
AACGTCAAGG CGATGGTCGG AGTCTGGTCT TTGGCAACGC CCAAAATGGC CGCAGATTTT
CCTGACTTGA TGCCCAACGT TTATGGCACC GCTGTACTGC CGTTTCCTGC GGAGTTCAAG
ACGGCTGAGG GTAAATCCTT CAACGATACC TATCAGAGGC TGTACAAGAA GGAGCCTGAC
TACCTGGGTC AGTTCGGCTA TGTTCAATCC ATGTTGCTGT TTGATGCCAT CGCTCGCGCT
GCAGACAAAG GCACGCTGAA AAAAGATGGC GTAGCCGAAG AGATGCGCAA GACCGATAGC
GAAACCTTGA TTGGCCGCGT TCAGTTCAGC AGCAACGGCG ACAACGTGAA TTTCAGCCAC
CGCATGGGTC AGCATCAAGG CAAAAAGATC GTCATAGTCT GGCCCAAAGC AGACGCAACC
GGCAAGGCCA ATTTCCCGGG CGTGCCCTGG TAA
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| Protein sequence | MMKNTCKSIG LAALVACGLG LSTAQADELL VGVELPLTGT LARVGAGMHE GIMVAADVFN
KTNSKHKIKI ITVDNESAPA KAIAAVEKLA SQGVVAIDGG YGSNNIAPAS DAASKLGLVY
VTSGGVDDSL VNSGRKNFFR INNSAGYQKA MVGLLGDLNV KSVSILYSTK EATAGLASDL
QKSLTAKGVT VVAHAFDPAM TDFKPIINKV KLQDKSEVIA MIGYENDYVG ILRAARVLKP
NVKAMVGVWS LATPKMAADF PDLMPNVYGT AVLPFPAEFK TAEGKSFNDT YQRLYKKEPD
YLGQFGYVQS MLLFDAIARA ADKGTLKKDG VAEEMRKTDS ETLIGRVQFS SNGDNVNFSH
RMGQHQGKKI VIVWPKADAT GKANFPGVPW
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