Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2549 |
Symbol | |
ID | 3960269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2808679 |
End bp | 2809497 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637917368 |
Product | putative transmembrane transcriptional regulator |
Protein accession | YP_523797 |
Protein GI | 89901326 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGGA CCTCCTCTCG CCCGCTGACG GAAGACGAAA TCCACACGCT GGTGGATGAT CAGCTGGCGC CCGACGCGCT GACAGCCCTG CAGACGCGGC TGGCACAAGA CCCGGCAGCG CAGGCCACGG TGACGAAATG GCGCCGCCAG CGTGACGCCC TGCGAAGCCT GCATCGGCAC CTTGTGGACC AGCCGGTCCC CGCCACGCTG GTGACCGCGG CGCGACAGAC CGCGGCCTCG CAGCAGGACA TCAACCAGTG GTGGCGCTGG GGCGGCATGG CCGCCGGGGT CATGCTGGCG TTTGGTGTGG GCTGGTTCTC CCACACAGCA TGGCAGGGTG AGGGGCGGCC ATCCGCTACC CTGGCCAGAG CATCTGGCGC GCCGGATTTT GCGCGACAGG CCAGTTTTGC ACACGCGGTG TACGCCCCGG AAATCCGGCA CCCGGTGGAG GTGGGCGCCA CGGAGCAGGA GCACCTGGTG CAGTGGCTCT CCAAGCGTGT CGGCAAGCCG CTCAAGGTGC CTCATTTGGC CGCACAAGGT TATGAGCTCG TGGGCGGACG CCTGCTGCCA GGTGAGGCCG GTGCGCGGGC GCAGTTCATG TTCCAGAATG CGGCCGGAAC CCGCATCACG CTTTATCTCG GCGCAATAGA CAAGTCCGGG GCCGGCGCTG ACATCCGCGA GACCGGCTTC CAGTTTCGCG CTGACGGGCC GATACCGAGT TTTTACTGGA TCGACCAGGG CTTTGGCTAT GCGCTATCCG GGCCGGTGCC GCGTGACGCA CTCATGAAAC TGGCAGAAGC GGTGTATCAC CAGCTGTAG
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Protein sequence | MNRTSSRPLT EDEIHTLVDD QLAPDALTAL QTRLAQDPAA QATVTKWRRQ RDALRSLHRH LVDQPVPATL VTAARQTAAS QQDINQWWRW GGMAAGVMLA FGVGWFSHTA WQGEGRPSAT LARASGAPDF ARQASFAHAV YAPEIRHPVE VGATEQEHLV QWLSKRVGKP LKVPHLAAQG YELVGGRLLP GEAGARAQFM FQNAAGTRIT LYLGAIDKSG AGADIRETGF QFRADGPIPS FYWIDQGFGY ALSGPVPRDA LMKLAEAVYH QL
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