| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2392 |
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| Symbol | |
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| ID | 3962062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2634884 |
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| End bp | 2636119 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637917210 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_523640 |
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| Protein GI | 89901169 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0592634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGG TCAGGAATGT TGTCGCTGCC ACGGTAGCTG CTTTGTGCGT CGGTGGTGCA
TTGGCCCAGG CTGGATCAAC CGTCAAAATC GCTTTTATTG ATCCGCTGTC CGGCCCGTTT
GCCAATGTGG GTCAAAACCA GCTCAAAAGC TGGCAATTTG TGGCAGAGCG CCTGAGCGGC
GCCAAGAATC CGGCTGGCGT GAAGTTTGAA GTCACAGGTT TTGACAACAA GGGGTCTCCC
CAGGAAAGTC TGAACTCACT CAAGGCCGCC ATCGACCAGG GCTTTCGCTA TGTGACCCAG
GGCAACGGCT CAGGCGCTGG CCTGGCGATT TCTGATGCCG TGTCCAAGCA CAATGCGCGC
AATCCGGGCA AGGAAGTGGT GTATCTCAAT TACGCCGCCG TTGATCCGGC GATGACCAAC
GAAAAATGCG ACTACTGGCA TTTCCGTCTG GATGCCGACA CCAGCATGAA GATGGAGGCC
TTGACCGCTT TCATGAAAGA CCAGCCGAGC GTCAAAAAAG TGTATCTGAT GAACCAGAAC
TACTCGCACG GCCAGCAAGT GTCCAAGTAT TTCAAGGAAG ACATTGCCCG CAAGCGCCCC
GATGTGAAAA TCGTCGGCGA CGATCTGACT CCGATTGGTC AGGTCAAGGA CTTTTCGCCT
TATGTTGCCA AGATCAAGCA AGCCGGCGCC GATGCTATCG TGACCGGCAA CTGGGGTGCT
GATTTGACGC TGCTGGTCAA GGCGCTCAAT GACGCGGGTC TCAAAATTCC CATGTATACC
TACTACGCGC AGGTCACCGG TACACCAACC GCATTGGCGG CTGGCGGCGA CAGCGAGGTT
TATGTGATTG CCTATGGCCA TGCCAACGAA CCCGGTGAAA TCGGCAAAAT CGCTGAGGAT
TTCAAGCAAA AATTCAACGA CGATTACTAC ACCTATGCGA CATACAACGG CATCAACCTG
ATGGCGGCGG CGATGGCCAA AGCCAAGTCC AGCGACCCGG TCAAGGTGGC AGCTGCGCTG
GAGGGCTTGA CGGTCAAGAG CTTTGCCGGT GAAGTGCAAA TGCGCAAATC CGATCACCAG
TTGCAGCAGT CCATGTTTGT GACCAAGTGG CAAAAAGTAG ACAAGAAAAA CCCTTACAGC
GTTGAGAACA CCGGCTACAC CTTTGCGCCG GTCAAGCAGA TGGACGCGTT CATTGCCAGC
ACGCCAACCA GTTGCCAAAT GAAACGGCCA GGCTAG
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| Protein sequence | MKLVRNVVAA TVAALCVGGA LAQAGSTVKI AFIDPLSGPF ANVGQNQLKS WQFVAERLSG
AKNPAGVKFE VTGFDNKGSP QESLNSLKAA IDQGFRYVTQ GNGSGAGLAI SDAVSKHNAR
NPGKEVVYLN YAAVDPAMTN EKCDYWHFRL DADTSMKMEA LTAFMKDQPS VKKVYLMNQN
YSHGQQVSKY FKEDIARKRP DVKIVGDDLT PIGQVKDFSP YVAKIKQAGA DAIVTGNWGA
DLTLLVKALN DAGLKIPMYT YYAQVTGTPT ALAAGGDSEV YVIAYGHANE PGEIGKIAED
FKQKFNDDYY TYATYNGINL MAAAMAKAKS SDPVKVAAAL EGLTVKSFAG EVQMRKSDHQ
LQQSMFVTKW QKVDKKNPYS VENTGYTFAP VKQMDAFIAS TPTSCQMKRP G
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