Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2333 |
Symbol | |
ID | 3962666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2563259 |
End bp | 2564899 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637917150 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_523582 |
Protein GI | 89901111 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.489388 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGAGT TAAACGCAGG CACAGAACGC GCCAAAGGCC TGGCGCGGCT CGACGCCCCC ACCTGGGACC TGGTGGTGAT TGGCGGCGGC ATCAGCGGCG CCGGGGTGGC ACAGCAGGCG GCGCGCCGCG GCTGGACCGT GCTGCTGATC GAGCAGCGCG ACTTTGCCTG GGGCACGTCC AGCCGCTCCT CCAAGCTGGT GCATGGGGGC TTACGCTACC TCAAGGAAGG CGACATCAAG ACCACCCTGC ACTCGGTGCG CGAGCGCGAG CGCCTGATGC GCGAGGCGCC AGAATTGATC GAGCCGCAGA GCTTTTTGTT TGCGAATTGC GAAGGGCGCA AGCCGGGCCG CTGGCTGTTT CAACTGGGCT TGACGATTTA CGACTGGATG GCAGGTCTTC GCAGCCATTT CTGGGCCGAT CTGGCGACCA CGCAGGCGCT GGCGCCGGGT CTGGCGCCAC CCAAAATGCG CGGCGCGCTG GTATTCCAGG ACGCCAAGAC CGACGATGCG CGTCTGGTGT GGCGTGTGCT GATGGAGGCG CAGCGCGACG GCGCACTGGT CTTGAACTAC GTGAGCGCAC TTGGCTTGCA GCTTGATGCG GGTCGCGTGT CCAGCATCAC GCTGCAAGAC GTGCTCACCC ACCAGCAATT TCAGGTACGT GCCAAAGCCG TGGTCAACGC CACCGGCGCC TGGGCCGACC GGCTGCGTGG AGCGGTGGGC GGCAAGCCCA TGCTGCGCCC TTTGCGCGGC AGTCACTTGG TGGTGCCGTT CTGGCGCTTG CCCGTCGCGC AATCCATCAG CCTGATGCAC CCGACGGACG ACCGACCCGT GTTTCTCTAC CCCTGGGAGG GCGCCACGCT GATTGGCACC ACCGACCTCG ATCACCGCGA GGATCTGGAT GTCGAGGCCT CCATCACGCC GCAAGAGGTG GACTACCTGC TGGCCGCCGT GAACGACCAG TTCCCCGCCG CCGCCCTGCG CGCCGCCGAT ATCAGCGCCT GTTACGCCGG GGTGCGTCCG GTGGTGGATG ACGGCACGGG TTCGGCCTCC CACGCCGCGC GGGACCATGT GGTGCTGGAT GAGTCGGGCC TGGTGACGCT GACCGGCGGC AAGCTCACGA CCTTTCGGCT GATGGCGCAA GACGCCTTGG CGCTGGCGGC GCCGCATGTC GGCAAGCCGT TTGCGCGAGA AGCCGCCGCC GTGTTCACCC CGGTAGGCGA ATTGAATCCA CGCTGGAGCG CGGCCGTGCG GCACCGGCTG GCGGCGCGCT ACGGCTATCG GGCGCAGGCA CTCTGCGCTG GCGCGACCGA CGCTGAGCTG CAAACCATTC CCGGCACCAA CACCCTGTGG CTGGAGCTCG CAATCGCGGC CAAGCATGAG GCCATCGAGC ATCTGGACGA TCTGCTGTTG CGCCGCACGC GGCTGGGCAT TCTGTTGCCG CGTGGTGGCC TGGACCATCT GGCGCGCATC CGGTCGCTGT GCGAGTCGCA TTTGCTGTGG AGCGATACCC AATGGCAAAC TGAGATCGAG CGCTACCGCG CGCTGATTGC CGCACACTAT CAAGCGCCCG ACCCACTCGT GATACCTTGC GGGGCAGACC GCAGCCTGCG CAGCAGGCCA GCTCTGTCCT CAACTGATTG A
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Protein sequence | MGELNAGTER AKGLARLDAP TWDLVVIGGG ISGAGVAQQA ARRGWTVLLI EQRDFAWGTS SRSSKLVHGG LRYLKEGDIK TTLHSVRERE RLMREAPELI EPQSFLFANC EGRKPGRWLF QLGLTIYDWM AGLRSHFWAD LATTQALAPG LAPPKMRGAL VFQDAKTDDA RLVWRVLMEA QRDGALVLNY VSALGLQLDA GRVSSITLQD VLTHQQFQVR AKAVVNATGA WADRLRGAVG GKPMLRPLRG SHLVVPFWRL PVAQSISLMH PTDDRPVFLY PWEGATLIGT TDLDHREDLD VEASITPQEV DYLLAAVNDQ FPAAALRAAD ISACYAGVRP VVDDGTGSAS HAARDHVVLD ESGLVTLTGG KLTTFRLMAQ DALALAAPHV GKPFAREAAA VFTPVGELNP RWSAAVRHRL AARYGYRAQA LCAGATDAEL QTIPGTNTLW LELAIAAKHE AIEHLDDLLL RRTRLGILLP RGGLDHLARI RSLCESHLLW SDTQWQTEIE RYRALIAAHY QAPDPLVIPC GADRSLRSRP ALSSTD
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