| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2306 |
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| Symbol | hisS |
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| ID | 3964108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2529071 |
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| End bp | 2530384 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637917123 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_523555 |
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| Protein GI | 89901084 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0921462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAC AATCTGTTGC CACCCGGCTG GAAAAATTGA CTGCCATCAA GGGTATGAAC
GATGTGTTGC CGCCTGATTC TGCGGCCGTT GAATGGCTGG AAGCCAAAGT GCGAGCCTTG
ATGGCGTGTT ATGCGTACCG GAACATTCGC ACGCCCATTG TGGAGCGCAC GCCGCTGTTT
ATTCGCGGCC TGGGTCAAGT CACTGATATT GTCGAAAAAG AAATGTATTC CTTCGAAGAC
AGCCTCAATG GGGACCTGTT GACGTTGCGA CCTGAAGCAA CTGCCGGTGT GGTGCGGGCA
GTAGTGGAGC ATTCCATGTT GTACGACGGC GGAAAACGTC TCTATTACAT CGGCCCGATG
TTTCGTCATG AGCGGCCCCA GCGTGGGCGC TATCGGCAGT TTGATCAGAT TGGCGCCGAG
GCCCTTGGAT TCTCGGGCGC AGAGGTGGAT GCAGAACTGA TTTTGCTGGC CGTGGCGCTA
TGGAAGGATT TGGGGTTGAC AGACGTTCGG CTTGAACTCA ACAGTCTGGG CCAACCGCAG
GAGCGCCTGG CGCACCGGCA AGCGTTGATT GATCACTTTG AGCGCTACGC TGATGTGCTG
GATGAAGATG CCAAGCGGCG TCTTTACAGC AATCCGCTTC GGATTCTCGA CACCAAAAAC
CCGGCGATGC AAACCGTGGT CGAGTCGGCA CCCAGACCAC TGGATTACTT GGGCGAGGCG
TCACTCGCTC ATTTCAACAC GTTGAAGACC ATTTTGGATG CCAACGGCGT TGCCTACATT
GTCAATCCAC GCCTGGTTCG CGGCATGGAT TACTACAACC TCACGGTATT CGAATTCACG
ACCGATCGCC TGGGTTCCCA GGGAACGGTA TGTGCCGGCG GTCGCTATGA CTATTTGATC
GAGCAACTGG GCGGCAAGCC GGCGCCGGCT GTCGGCTGGG CTCTAGGCGT TGATCGGGTG
CTTGAACTTA TCCGGGAACA AGGCTTGGAC AGTGTCGTGC CACCGCTCGA TGCCTATGCC
ATCGTGCCTG ATGTTGAGGC CCTGCCTTTG GTACTGCAGA CACTGCAAAC GCTACGGACG
GCGGGGGTTA GTGTTCAGAT GCATACCAGC TCGGGTGACG GGATGGGCAG CATGAAATCC
CAATTCAAAC GCGCCGATGG CAGTGGCGCC CGGTTTGCCC TTGTTTTTGG TGCTGATGAA
ATAGCAAAGA ATCTGGTCAT CGTTAAATCA CTGCGTGATG GCAGTGGCGC ACAAGTCAGC
CAATCGCTAA CAGACGTGCT GGGCTGGTCG TCCACCCTAC AATCGCAAAC TTAA
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| Protein sequence | MSEQSVATRL EKLTAIKGMN DVLPPDSAAV EWLEAKVRAL MACYAYRNIR TPIVERTPLF
IRGLGQVTDI VEKEMYSFED SLNGDLLTLR PEATAGVVRA VVEHSMLYDG GKRLYYIGPM
FRHERPQRGR YRQFDQIGAE ALGFSGAEVD AELILLAVAL WKDLGLTDVR LELNSLGQPQ
ERLAHRQALI DHFERYADVL DEDAKRRLYS NPLRILDTKN PAMQTVVESA PRPLDYLGEA
SLAHFNTLKT ILDANGVAYI VNPRLVRGMD YYNLTVFEFT TDRLGSQGTV CAGGRYDYLI
EQLGGKPAPA VGWALGVDRV LELIREQGLD SVVPPLDAYA IVPDVEALPL VLQTLQTLRT
AGVSVQMHTS SGDGMGSMKS QFKRADGSGA RFALVFGADE IAKNLVIVKS LRDGSGAQVS
QSLTDVLGWS STLQSQT
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