Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_2155 |
Symbol | |
ID | 3961206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 2339030 |
End bp | 2340070 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637916975 |
Product | HAD family hydrolase |
Protein accession | YP_523410 |
Protein GI | 89900939 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1877] Trehalose-6-phosphatase |
TIGRFAM ID | [TIGR00685] trehalose-phosphatase [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.555356 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCCA AAAATCCAAG CTCTGAACAA CTTGACGTGA AACCGGCCCG CAGCGTGGTG GTGGAAGAAG CGCTTGCCGG TGTGCAGGCG GGCCGACGTG CCGGGTTTGG CATGGTCGTC GGCGTGGACC GTAGCGGCCA TGCACAGGAA CTGAAAGACG CCGGCGCGCA CATGGTGGTG ACTGATCTGG TGGAGGTCAG CGTAGCGCAG GAAGTCGCAC CTGCCCGACG TCGCAGTGAC GAACTTCCTT CCGCTCTGGC GGCGCTCGCA GACATCAAAG CCCGTATGAA AGGCAGAAGC CCTGCGGTTT TTCTTGACTA TGACGGCACG TTGACGCCGA TTGTGCAAAG CCCCGAGCTG GCACTGCTGT CGGACGACAT GCGTGATGCG GTGCGCACAC TGGCCCGGCG CTGCACGGTG GTCGTGATGA GTGGCCGGGA TCTGCCCGAT GTGCAGGCAA GGGTGGGTTT GAAAGACATT GTTTATGGTG GCAGCCATGG CTTTGAAATC TTCGGCCCCC AGGGCATGCA CTTCGAGCAG GAGCAGGGCG GCGAATTTCT GCCCCAGCTC GACCGGGCCG AGCTGGCGCT GCGGGAGCGA CTTGGGCACG TTCCCGGCCT TCTGGTCGAG CGCAAGAAAT ACGCCATCGC AGTCCATTTT CGCCTCGTGG GGGAGTCTGA CCTGGAGGCC GTGGAGCCCG CTGTGAATGC GGTGCTTGCA GCACATCCGA AACTGCGCAA AACCCACGGC AAGATGATTT TTGAAGTGCA GCCGGATATC GACTGGGACA AGGGCCGGGC CATGATCTGG CTGCTCGGAA AGCTCGGCCT GGCGCAATCC GATGTATTCG TGCTTTATCT TGGGGACGAC ATCACCGACG AGGATGCATT CAGGTCGCTG AACGCGCAAG GCAACGGCAT CGGCATCCTG GTGCGCGACG AGCCCCGCGA CACCGCGGCG CAGTATGCCC TGGGCAGCAT TGAGGAAGTT CGACGTTTTC TGACTGAACT TGCCACCCTG ACAGAGGGGA CAAGGGCATG A
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Protein sequence | MNAKNPSSEQ LDVKPARSVV VEEALAGVQA GRRAGFGMVV GVDRSGHAQE LKDAGAHMVV TDLVEVSVAQ EVAPARRRSD ELPSALAALA DIKARMKGRS PAVFLDYDGT LTPIVQSPEL ALLSDDMRDA VRTLARRCTV VVMSGRDLPD VQARVGLKDI VYGGSHGFEI FGPQGMHFEQ EQGGEFLPQL DRAELALRER LGHVPGLLVE RKKYAIAVHF RLVGESDLEA VEPAVNAVLA AHPKLRKTHG KMIFEVQPDI DWDKGRAMIW LLGKLGLAQS DVFVLYLGDD ITDEDAFRSL NAQGNGIGIL VRDEPRDTAA QYALGSIEEV RRFLTELATL TEGTRA
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