| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_2087 |
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| Symbol | |
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| ID | 3961253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 2262073 |
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| End bp | 2262990 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637916907 |
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| Product | lipopolysaccharide biosynthesis protein-like |
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| Protein accession | YP_523343 |
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| Protein GI | 89900872 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3754] Lipopolysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACCGT TGGCAGATAT TTGGCGCCGC TGGCGCCGTC AGATTAAATC CAGCGCGCCA
TTCGTACGGC GCCGTACCTA CCGCATCCTG CTGAACAAGA ATGCACGACT GATCGAATCT
CTTGATGGCT TGGCGACACC GGCAAGCCAG GCAAGAGTGG AAATCCGCAA ACCCCTGGCA
CAAAACCTGG AAGGTGAAGT CTGTCTGTTC GTGACCCACG CCGCTCAGCC AGTGCTCAAA
ACACACGTCA TTCACCATGT TGAACATCTG CTGGACGCGG GCATACAGGT GATTCTGATT
GTGAACACCA ACCTGGCAAC CGACACACTG ACCATCGATG CGGACTTGGA GGCGCGATTG
AGCGGTGTGC TAGTGCGCGA GAACACCGGT TTTGACTTTG GGGCATGGGC TCACGCCTAC
AGCCTGCTTG ACCGTAAGTT GTGGCATAGG CTCTACCTTA TCAACGACAG CATTGTTGGC
CCACTCGGCC AAACCGAGTT CGCCCGCATG ATGGGACGAA TCAAGGCCAG CAGCGCTGAC
TTCATTGGAT TAACTGAAAG TCTGGCACCA GCAAGGCATT TGCAAAGCTA CTTTCTGGTA
TTCAATCGAA ACGCGCTTCT CAGTCACGCA TTTAACAAGC GAATACTTAG CATTCAAAAC
CTCCCAGAAA AGGGGCAGGT GGTGGATATC TATGAAATCA GATTGACCCA GCAGCTCTGC
GCGCTAGGCC TGCGTTTTGA GGCGCTATTT CCAACCCTGT CCAACGATTT CTATAACTCT
AACGATACTG CGTCCCGATG GGAGCAACTG TTATCGGCCG GATTCCCTTA TCTGAAGACT
AGCGTGATCA AGGAACTTCC GCGCGCCCCA AAAATCTTGA TGGCCCGTGC GAGTGGTCAG
GTCGATGCAC AAATTTGA
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| Protein sequence | MQPLADIWRR WRRQIKSSAP FVRRRTYRIL LNKNARLIES LDGLATPASQ ARVEIRKPLA
QNLEGEVCLF VTHAAQPVLK THVIHHVEHL LDAGIQVILI VNTNLATDTL TIDADLEARL
SGVLVRENTG FDFGAWAHAY SLLDRKLWHR LYLINDSIVG PLGQTEFARM MGRIKASSAD
FIGLTESLAP ARHLQSYFLV FNRNALLSHA FNKRILSIQN LPEKGQVVDI YEIRLTQQLC
ALGLRFEALF PTLSNDFYNS NDTASRWEQL LSAGFPYLKT SVIKELPRAP KILMARASGQ
VDAQI
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