15 homologs were found in PanDaTox collection
for query gene Rfer_2087 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007908  Rfer_2087  lipopolysaccharide biosynthesis protein-like  100 
 
 		 305 aa  626  1e-178  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
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NC_010505  Mrad2831_3634  glycosyl transferase group 1  36.64 
 
 		 1044 aa  147  2.0000000000000003e-34  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.578618  normal  0.0749406 
 
 
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NC_011894  Mnod_4336  Lipopolysaccharide biosynthesis protein-like protein  32.54 
 
 		 1366 aa  130  4.0000000000000003e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.350964  n/a   
 
 
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NC_009511  Swit_4009  glycosyl transferase, group 1  35.19 
 
 		 1386 aa  122  9e-27  Sphingomonas wittichii RW1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007516  Syncc9605_0194  lipopolysaccharide biosynthesis protein-like  31.14 
 
 		 1030 aa  112  6e-24  Synechococcus sp. CC9605  Bacteria  normal  0.478179  normal  0.202033 
 
 
-
 
NC_009484  Acry_1351  lipopolysaccharide biosynthesis protein-like protein  28.08 
 
 		 326 aa  100  4e-20  Acidiphilium cryptum JF-5  Bacteria  normal  0.054714  n/a   
 
 
-
 
NC_007513  Syncc9902_0638  glycosyltransferase  36.09 
 
 		 972 aa  99.4  7e-20  Synechococcus sp. CC9902  Bacteria  normal  0.770569  n/a   
 
 
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NC_007516  Syncc9605_2031  glycosyltransferase  33.51 
 
 		 1003 aa  97.8  2e-19  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007614  Nmul_A1172  lipopolysaccharide biosynthesis protein-like  29.34 
 
 		 325 aa  94.4  2e-18  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.535151  n/a   
 
 
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NC_007925  RPC_4196  putative glycosyltransferase  28.89 
 
 		 321 aa  83.2  0.000000000000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.97214 
 
 
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NC_008532  STER_1432  polysaccharide biosynthesis protein  26.26 
 
 		 581 aa  75.1  0.000000000001  Streptococcus thermophilus LMD-9  Bacteria  normal  0.763455  n/a   
 
 
-
 
NC_008527  LACR_0212  lipopolysaccharide biosynthesis protein  25.12 
 
 		 588 aa  71.2  0.00000000002  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_007801  Jann_4277  lipopolysaccharide biosynthesis protein-like  32.18 
 
 		 359 aa  58.9  0.0000001  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.52167 
 
 
-
 
NC_011830  Dhaf_4462  Rhamnan synthesis F  22.34 
 
 		 606 aa  47.8  0.0002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_1572  lipopolysaccharide biosynthesis protein  24.82 
 
 		 666 aa  47  0.0004  Bifidobacterium longum DJO10A  Bacteria  normal  0.211326  n/a   
 
 
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