| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1946 |
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| Symbol | |
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| ID | 3964128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | + |
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| Start bp | 2089331 |
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| End bp | 2090593 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637916765 |
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| Product | major facilitator transporter |
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| Protein accession | YP_523202 |
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| Protein GI | 89900731 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.086986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCTCTG CGCGGTTGAA ACGATTCACT TACCATCGCA GCATGACCAG TACCTCCCTT
CATTTACCCC TCGCCGTGCC GCTCAAACAG GATGCCACCA TCATTGGCCT TGTCGGCCTG
GCCCATGCCA GTTCCCATTT TGCCCATCTG TTGCTGGCGC CGCTGTTTCC GGTGTTTATG
ACCGAGTTTG GTTTGAGCTA CGCCGAGTTG GGATTGCTGA TGACCACGTT TTTCGTGGTT
TCGGGGCTGG GGCAGGCCTC TGCCGGTTTT GCGGTGGATC GGCTCGGCGC CAGGCCGCTG
CTGTTTGTGG CGCTGGGGAT TTTTGTGCTG GCGTGTGGCG CGGCGTCCCT GGTGACGGGT
TACGCAGGCT TGGTCGGCGT GGCAGCGCTG GCGGGCTTGG GCAATGCCAT TTTTCATCCG
GTTGATTTCA CTATTTTGAA TCAAAGAGTC TCCGCCCCGC GGCTGGGCCA TGCCTTCAGC
GCCCACGGCT TGACCGGCTA TCTGGGCTGG GCCGCGGCCC CGGTCTTTCT GGTCACGCTG
AGCAGTCTGT ACAACTGGCG CACGGCCTAT CTGGCCGCCG CGGTGATGTA TGTCGGCATT
CTGGTGTGGC TGATTTTGCA GCGCGACAAA CTGAGCACCC AGGTGGCGGT GCAGCATGCA
GACGTTGGGG CAGAACACAG TATGGCGTTC ATGAAGTTGC CGGTGGTGTG GTGGTGCTTT
GCCTTCTTTC TGTTCTCCAC CATGACGCTG GCGGTGGTGC AAAGCTTTTC GGTCTCCATT
CTCAAAGCCA TGCACGGCGT CAGCTTTGAG GCCGCTACCC TGACGCTGAC TGCCTACATG
TTGTGCGGCG CGGTGGGTAT CTTTGTGGGC GGATTTGTGG CGGCGCGCAC TGGACATAGT
GATCGTGTGG TTGCCATGTC GATGGCGGTG GCCGCTGTGT TGCTGGCGCT GTGTGGCACC
GGCCTTTTGG GTGCCACGGG CACCATGGTG GTGCTGGCGG GTACGGGATT TGCGGTCGGG
ATTGGCGGGC CGTCACGCGA CATGATGATC AAAAATGCCA CGCCCCAGGG CGCCACGGGC
CGGGTTTATG GTCTGGTGTA TTCGGGTCTG GATACCGGCT TCGCGCTATC GCCCTTTGTG
TTTGGCGTGT TCATGGACCG GGGCTGGTAT GGCGCAACGC TGTTCGGTGC AGCGGCGGTG
CTGCTGCTGA GTGTGGTGGC GGCGCTGGGG GTGGGCCAGA GGACGGCGCG GTCAAGAAGG
TAG
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| Protein sequence | MRSARLKRFT YHRSMTSTSL HLPLAVPLKQ DATIIGLVGL AHASSHFAHL LLAPLFPVFM
TEFGLSYAEL GLLMTTFFVV SGLGQASAGF AVDRLGARPL LFVALGIFVL ACGAASLVTG
YAGLVGVAAL AGLGNAIFHP VDFTILNQRV SAPRLGHAFS AHGLTGYLGW AAAPVFLVTL
SSLYNWRTAY LAAAVMYVGI LVWLILQRDK LSTQVAVQHA DVGAEHSMAF MKLPVVWWCF
AFFLFSTMTL AVVQSFSVSI LKAMHGVSFE AATLTLTAYM LCGAVGIFVG GFVAARTGHS
DRVVAMSMAV AAVLLALCGT GLLGATGTMV VLAGTGFAVG IGGPSRDMMI KNATPQGATG
RVYGLVYSGL DTGFALSPFV FGVFMDRGWY GATLFGAAAV LLLSVVAALG VGQRTARSRR
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