Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1901 |
Symbol | |
ID | 3963230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | - |
Start bp | 2041416 |
End bp | 2042213 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637916721 |
Product | ABC transporter related |
Protein accession | YP_523158 |
Protein GI | 89900687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0159617 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACGT CCACGTCAAA ACCACTCGTG ATGCAGACCA AGGGCATCGT CAAACGCTAC GGCCAGGTGA CCGCGCTGGA CGGTACCGAC TTTGAACTAC GCGCGGGAGA AATCATGGCC ATCATTGGCG ACAACGGCGC GGGAAAATCG TCGCTGATCA AGACCCTGTC AGGTGCCTCT GTGCCCGATG AAGGCGAGAT CTTTCTTGAC GGCAAATCTG TGCACTTCAA GTCGCCCATC GATGCCCGCC GCGCCGGCAT CGAGACGGTC TACCAGGACT TGGCGGTGGC CCCGGCCATG AGTATTGCCG AGAACCTGTT CCTGGGCCGC GAACTCATCA GGCCCGGCCT GCTGGGCCAC CTGCTGCAAC TGCTGGACAA GAAAGAAATG CTGGCGCAGG CGATTGCACG CATGCAGGAA CTCAAGGTTG GCATCCGCTC CATGACACAG GCGGTGGAAA CCCTGTCGGG TGGCCAACGG CAGTGCGTGG CCGTGGCCCG CGCGGCCGCC TTTGCCCAGC ATGTGGTGAT CATGGACGAG CCCACCGCTG CGTTGGGCGT GAAAGAAGGC AACATGGTGC TGGAGCTGAT TCGCCGGGTA CGCGACAAGG GCCTGCCGGT GATTCTGATC AGCCACAACA TGCCACACGT GTTTGAGGTG GCGGACCGCA TCCACATCCA GCGCCTGGGT AAACGCGCCG CGGTGGTCAA CCCCAAAACC ATCAGCATGA GCGACACCGT GGCCGTGATG ACAGGGGCCA AGACGGTGGA CGAACTGCCC GCCAACGCCC ACGCCTGA
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Protein sequence | MNTSTSKPLV MQTKGIVKRY GQVTALDGTD FELRAGEIMA IIGDNGAGKS SLIKTLSGAS VPDEGEIFLD GKSVHFKSPI DARRAGIETV YQDLAVAPAM SIAENLFLGR ELIRPGLLGH LLQLLDKKEM LAQAIARMQE LKVGIRSMTQ AVETLSGGQR QCVAVARAAA FAQHVVIMDE PTAALGVKEG NMVLELIRRV RDKGLPVILI SHNMPHVFEV ADRIHIQRLG KRAAVVNPKT ISMSDTVAVM TGAKTVDELP ANAHA
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