| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1790 |
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| Symbol | truA |
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| ID | 3963310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1925966 |
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| End bp | 1926748 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637916613 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_523050 |
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| Protein GI | 89900579 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAGGCTGG CACTCGGCGT CAGCTACAAC GGGCAAGCCT ACCAAGGCTG GCAAAGCCAG
TTGTCGAGGC AAACCGTGCA GGACCAGCTT GAAATGGCAC TGAGCAAATT GGCATCGCAC
CGGGTTTCTA CCCTGTGTGC AGGTCGAACA GACGCGGGGG TGCATGGCCT GATGCAGGTG
ATTCATTTTG ATACCCCACT TGATCGCGCC CCCAATTCCT GGGTACGGGG CACCAATGCT
CTCTTGCCGC GCGACATTGC GGTCGAGTGG GCCAGGCCCG TGCCCCCTGA ATTTCATTGC
CGTGCCAGCG CGCTGTCACG CCGCTATGCC TATATTTTGC TGGAATCACC AGTGCGCCCC
AGCATCGATG CGGGCCAGGT CGGTTGGACT TTCAAACCGC TGGAACAGGT GGCCATGCAG
CAGGCGGCGA GCCACTTGCT GGGTGAGCAC GACTTCAGTT CGTTTCGGGC ATCGGCCTGC
CAGGCGCTGT CGCCAGTCAA AATGCTGCAG CGCCTCGACA TCTCGCGCCA TGGTGCCTGC
TGGCGTTTTG AGTTTGAGGC CAACGCTTTT TTGCATCACA TGATCCGCAA CATCATGGGT
TGCCTGATTA CCGTGGGCCA AGGCAAAAAA CCTCCCGAGT GGCTCAAAGA GGTGCTGCTG
GCGCGCAACC GCAATGTTGC GGCGCCGACC TTTTCCGCGC ACGGACTCTA TTTTCTGGGG
CCGCGCTATG CGCCGCACTG GGGTTTGCCG GATCGCACCC CTGCCTTTGA TCGATTGCCA
TGA
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| Protein sequence | MRLALGVSYN GQAYQGWQSQ LSRQTVQDQL EMALSKLASH RVSTLCAGRT DAGVHGLMQV
IHFDTPLDRA PNSWVRGTNA LLPRDIAVEW ARPVPPEFHC RASALSRRYA YILLESPVRP
SIDAGQVGWT FKPLEQVAMQ QAASHLLGEH DFSSFRASAC QALSPVKMLQ RLDISRHGAC
WRFEFEANAF LHHMIRNIMG CLITVGQGKK PPEWLKEVLL ARNRNVAAPT FSAHGLYFLG
PRYAPHWGLP DRTPAFDRLP
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