| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rfer_1694 |
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| Symbol | |
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| ID | 3960706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodoferax ferrireducens T118 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007908 |
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| Strand | - |
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| Start bp | 1823122 |
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| End bp | 1825158 |
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| Gene Length | 2037 bp |
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| Protein Length | 678 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637916518 |
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| Product | integral membrane protein-like |
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| Protein accession | YP_522955 |
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| Protein GI | 89900484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0225851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG ACCTGCGCCT GACCTTTCAC TACGGGCTTA CCATTTTCCT CAGCGCGTTC
CTGCTGTTCC AGGTACAGCC CTTGATTGGC AAGATGATTC TGCCCTGGTT TGGTGGCTCG
GCCGCCGTTT GGACGACCTG CATGTTGTTC TTCCAGCTGG TCTTGTTGCT GGGCTATTTT
TACTCCCACT GGGTGGTTCG CTACCTCAGT CCTTCCCGCC AAAGCCTGGT GCACGCCAGC
TTGCTGTTGG TCAGCTTGCT GCTGATCCCG ATCAGCCCGA GCCTGGACTG GAAGCCAACG
GGCGCCGAGA ATCCCACCCT GCGCATCCTT GGCTTGCTGA CCGTGTCCAT CGGCTTGCCC
TACTTTGTGC TGTCAACCAC GGGCCCGCTA CTGCAGGCCT GGTTTGCGCG GGAGCGTTCG
GGGCTGGTGC CCTATCGTTT GTTCGCCCTG TCCAACTTTG GCTCCATGCT GGCGCTGCTG
GCCTACCCGG TGGCGGTGGA ACCCATTTTC CCGACCCTCT GGCAGTCCTA CCTGTGGTCG
GGCCTGTATG CCTGCTTTGT CGCAGCCTGC GCGCTCCTGG CCTGGCGTGG GCGCCATGGC
GTTCCCATCA TCGAGCAAGC CCATCACGAA GGCCCGGCGC CGCGTTGGGG GGACAAGGTG
CTGTGGGCGG CCCTGGCGGC CTGCCCGTCG ATTTTGATGG TGGCCGACAC CAGTTTCCTC
ACCACCAACA TTGCACCCAT CCCCATGATC TGGGTCGCAC CCTTGGCCTT GTACCTGCTT
TCATTCATCA TGAGCTTTGA GCGCCGCGGC TGGTACCAGC GCAAAGTGTT CCTGCCTTTG
CTGGTGCTGG GGTTGAGTGC TCTGGCCTAC CTGCCAACCC TGGGGATTGA CGTATTTCCC
CTCTCAATCT CCATGGGGAT CAACCTGGCG GCCTTCTTTG TCGCCTGCAT GGTGTGCCAC
GGCGAACTCG CCCGCCTGCA GCCGCACCCC AGCCATCTGA CCGGCTACTT CCTGATGCTG
GCAGTCGGTG GTGTGGTCGG TGGTTTTTTT GTCGGGGTCA TCGCGCCCTA CTGGTTTAAC
AGCAACTACG AGTTGTCGAT TGGCATTTTG CTCACCGGAC TGGTTGCAGC CATCGCGATC
ATCCCCAAGA TGGAATTTGC ACGCCCTTTG TGGCGTCGCG TTGGTATTTT CTTTACTGCG
GCGCTGCTGT TGGCGTTGGC CTGGATTCGC ATTGACGACC ACATGGAAGA GACCCGCGGC
GCAGAACTGA CGACGCGCAA TTTCTACGGT ACCTTGCAGG TCTTTAACAA CGTACCGGAT
GCCTACCGCA CCATGTACCA TGGGCAAATC ACCCATGGGC GACAACACAC GGCACCGGAC
AAGCTGGACC TGCCCACCGC CTATTACAGC CCGGACGGCG GTGCGGGCAA AGCCTTGCAG
ATCAAGGCCG GACAGGGTCT ACTGCGGGTC GGGGTGATTG GTCTGGGCGT CGGCACACTG
GTGAGCTACG GACGCAAAGG CGATTACTTC CGGCTCTACG AGATTGATCC CATGGTGATC
GACATCGCCC GCCATAATTT CAGCTTTCTC TCACGTACCC AAGCCGCTAC CGAAATTGTT
CTGGGCGATG CCCGCCTGCA GTTGGAGAGG GAACCCGCGC AATTATTTGA CGTGCTGGTG
GTTGACGCCT TCTCTGGCGA CTCGGTGCCC ATCCATTTGC TGACGCTTGA GGCATTTGCC
CAGTACTTCA GGCATCTCAA GCCCGAGGGT GTGCTGGCGG TGCACATTAC CAACCGGTTT
TTGGACCTGC GGCCGGTGGT GAAGACGGCG GCCAATCATT TTGGCAAGGA GCTGCGTCTG
GTGGATTCAG AGGGCATTCC TGAAAAATTG GTGTTGCGTT CACGCTGGGC ACTGATCAGC
AGTGATGCTG CCTTCTTCAG AGACCCCCGC CTCAGCAGTG CAACGACGAT TGCCGATCCA
GACCGGTTCC GGCCATGGAA AGATGACTAC AGCAGTATCT TCTCCATCCT GCAATAG
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| Protein sequence | MKIDLRLTFH YGLTIFLSAF LLFQVQPLIG KMILPWFGGS AAVWTTCMLF FQLVLLLGYF
YSHWVVRYLS PSRQSLVHAS LLLVSLLLIP ISPSLDWKPT GAENPTLRIL GLLTVSIGLP
YFVLSTTGPL LQAWFARERS GLVPYRLFAL SNFGSMLALL AYPVAVEPIF PTLWQSYLWS
GLYACFVAAC ALLAWRGRHG VPIIEQAHHE GPAPRWGDKV LWAALAACPS ILMVADTSFL
TTNIAPIPMI WVAPLALYLL SFIMSFERRG WYQRKVFLPL LVLGLSALAY LPTLGIDVFP
LSISMGINLA AFFVACMVCH GELARLQPHP SHLTGYFLML AVGGVVGGFF VGVIAPYWFN
SNYELSIGIL LTGLVAAIAI IPKMEFARPL WRRVGIFFTA ALLLALAWIR IDDHMEETRG
AELTTRNFYG TLQVFNNVPD AYRTMYHGQI THGRQHTAPD KLDLPTAYYS PDGGAGKALQ
IKAGQGLLRV GVIGLGVGTL VSYGRKGDYF RLYEIDPMVI DIARHNFSFL SRTQAATEIV
LGDARLQLER EPAQLFDVLV VDAFSGDSVP IHLLTLEAFA QYFRHLKPEG VLAVHITNRF
LDLRPVVKTA ANHFGKELRL VDSEGIPEKL VLRSRWALIS SDAAFFRDPR LSSATTIADP
DRFRPWKDDY SSIFSILQ
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