Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rfer_1639 |
Symbol | |
ID | 3964168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodoferax ferrireducens T118 |
Kingdom | Bacteria |
Replicon accession | NC_007908 |
Strand | + |
Start bp | 1769999 |
End bp | 1770874 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637916462 |
Product | LysR family transcriptional regulator |
Protein accession | YP_522900 |
Protein GI | 89900429 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACACCT TATTTCTTGA AACTTTGATC GCGGTTGTTC ACAGTGGCAC GCTGGTCGAC GCCGCGCGTC AAATGAATGT GACGCCGGGG GCCGTGGCGC AACGCTTGCA GACGCTGGAG GCCGAGATGG GAACCAAGCT TGTCATGCGA GCCGGACGCA CGGTGCGCCC GACCGAAGCC GGTGCAAAAC TGGCCTTGCG GGCCCGAAGT GTTCTAAGAG ATTTCAACGA CCTGCGCTTT GTGGTCGACC ACGACATTCT TTCTGGTGAA CTCAGGATTG GCGCCATCGC AACCGCGCTC ACCGGGATGG TTCCGCACAT GCTGGGGGGA CTGGTCAAAT TACATTCAAA AATTGAAGTT TTCATCGAAC CCGGTTCCTC GGAACGTCTG TATCGACGCG TTCACAACGG CGATCTGGAT GCCGCCATCA TTGTCAAACC GGGGTTTCCC ATTCCGAAAG TGCTGGACTG GATCAATCTG AGAAAAGAAC CATTGATCGT CATCGCCTCG ACTACAACCA CGCAAGACGA CCCCCATGCT CTTTTAATGA GTCACCCCTT TATCAGTTAC GACAAAAATC AATGGGGCGG TCACCTTGCG GAACGCTACT TGCAGCAGGC AGGCCTGGCC CCGAAAGTCC GGTTTGAACT GGATGCGCTT GACGCGATCG CCGTCATGGT GGATCAAAAT TTAGGCGTGT CTTTGATCCC GGACTGGGCG CCACCTTGGC CGCAAGGTCT TTCGCTAAAA AAAATCTCCC TTTCACGACC CCACCAAAAC CGGGAGGTCG GCCTGATCTG GAACAAAGGG TCTTCTCGCA TTCGGCTGGT CGATGCTTTT CAAAAAGAGG CCATGCGTTT CGCACAACCT GGGTAG
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Protein sequence | MDTLFLETLI AVVHSGTLVD AARQMNVTPG AVAQRLQTLE AEMGTKLVMR AGRTVRPTEA GAKLALRARS VLRDFNDLRF VVDHDILSGE LRIGAIATAL TGMVPHMLGG LVKLHSKIEV FIEPGSSERL YRRVHNGDLD AAIIVKPGFP IPKVLDWINL RKEPLIVIAS TTTTQDDPHA LLMSHPFISY DKNQWGGHLA ERYLQQAGLA PKVRFELDAL DAIAVMVDQN LGVSLIPDWA PPWPQGLSLK KISLSRPHQN REVGLIWNKG SSRIRLVDAF QKEAMRFAQP G
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